ZSCAN12 and PGBD1

Number of citations: 50 (PubMedID 32296183)
Data Source: BioGRID (two hybrid)

		ZSCAN12	PGBD1
Name		zinc finger and SCAN domain containing 12	piggyBac transposable element derived 1
Structure		No pdb structure	No pdb structure
GO Annotations	Cellular Component	Nucleus	Membrane
	Molecular Function	RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding DNA-binding Transcription Factor Activity, RNA Polymerase II-specific DNA Binding Protein Binding Zinc Ion Binding Metal Ion Binding Sequence-specific Double-stranded DNA Binding	DNA-binding Transcription Factor Activity Protein Binding Identical Protein Binding Sequence-specific DNA Binding
	Biological Process	Regulation Of Transcription By RNA Polymerase II	Regulation Of Transcription By RNA Polymerase II
GWAS		Asthma and major depressive disorder ( 31619474 ) Autism spectrum disorder or schizophrenia ( 28540026 ) Brain morphology (MOSTest) ( 32665545 ) Chronic obstructive pulmonary disease ( 33909500 ) Fish- and plant-related diet ( 32066663 ) Lung cancer ( 28604730 ) Refractive error ( 32231278 ) Sarcoidosis (Lofgren's syndrome vs non-Lofgren's syndrome) ( 26651848 ) Sleep duration (short sleep) ( 30846698 ) Smoking initiation (ever regular vs never regular) ( 30679032 ) Squamous cell lung carcinoma ( 28604730 ) Subcortical volume (MOSTest) ( 32665545 )	Asthma and major depressive disorder ( 31619474 ) Autism spectrum disorder or schizophrenia ( 28540026 ) Brain morphology (MOSTest) ( 32665545 ) Fish- and plant-related diet ( 32066663 ) Hemoglobin levels ( 32327693 ) Kawasaki disease ( 33106546 ) Lung cancer ( 28604730 ) Myopia ( 27182965 ) Pulse pressure ( 30578418 ) Refractive error ( 32231278 ) Squamous cell lung carcinoma ( 28604730 ) Subcortical volume (MOSTest) ( 32665545 )
Interacting Genes		26 interacting genes: BICD2 CENPH CEP70 FAM161A KRTAP10-1 KRTAP10-8 LMNA MID2 MTUS2 PGBD1 RACK1 SCAND1 SRPK2 SSX2IP TFIP11 VCX VLDLR VPS26A ZKSCAN7 ZNF24 ZNF397 ZNF446 ZNF473 ZNF496 ZSCAN21 ZSCAN32	8 interacting genes: MEOX2 NR4A1 TRAF2 ZKSCAN7 ZNF496 ZSCAN12 ZSCAN22 ZSCAN32
Entrez ID		9753	84547
HPRD ID		15767	11426
Ensembl ID		ENSG00000158691	ENSG00000137338
Uniprot IDs		A0A804HJ42 O43309	Q96JS3
PDB IDs		Not available	Not available
GO Terms Enriched among Interactors		None	RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding DNA-binding Transcription Factor Activity, RNA Polymerase II-specific Regulation Of DNA-templated Transcription Regulation Of RNA Biosynthetic Process Zinc Ion Binding Regulation Of RNA Metabolic Process DNA Binding Regulation Of Nucleobase-containing Compound Metabolic Process Regulation Of Transcription By RNA Polymerase II Regulation Of Gene Expression Regulation Of Macromolecule Biosynthetic Process Regulation Of Primary Metabolic Process Sequence-specific Double-stranded DNA Binding Regulation Of Macromolecule Metabolic Process Metal Ion Binding Regulation Of Metabolic Process TORC2 Complex Disassembly TRAF2-GSTP1 Complex TORC1 Complex Assembly CD40 Receptor Binding Sphingolipid Binding IRE1-TRAF2-ASK1 Complex Tumor Necrosis Factor Receptor Superfamily Complex Detection Of Lipopolysaccharide Cellular Response To Corticotropin-releasing Hormone Stimulus Somite Specification CD27 Signaling Pathway Non-canonical Inflammasome Complex Assembly Tumor Necrosis Factor Binding Tumor Necrosis Factor Receptor Superfamily Binding