SAFB and LINC00941

Number of citations of the paper that reports this interaction (PubMedID 35977942)
48

Data Source:
BioGRID (unspecified method)

		SAFB	LINC00941
Description		scaffold attachment factor B	long intergenic non-protein coding RNA 941
Image		No pdb structure	No pdb structure
GO Annotations	Cellular Component	Nucleus Nucleoplasm Midbody
	Molecular Function	RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding Nucleic Acid Binding DNA Binding Chromatin Binding Double-stranded DNA Binding RNA Binding Protein Binding Sequence-specific DNA Binding	Promoter-enhancer Loop Anchoring Activity
	Biological Process	Chromatin Organization Regulation Of Transcription By RNA Polymerase II Estrogen Receptor Signaling Pathway Regulation Of MRNA Processing Regulation Of Androgen Receptor Signaling Pathway	Positive Regulation Of Cell Population Proliferation Positive Regulation Of Transcription By RNA Polymerase II Positive Regulation Of Canonical Wnt Signaling Pathway Chromatin Looping
Pathways		SUMOylation of transcription cofactors
Drugs
Diseases
GWAS		Mean reticulocyte volume ( 32888494)
Interacting Genes		30 interacting genes: ABHD16A CDC37 CEBPA CHD1 CHD3 CLK1 CSNK2A1 CYCS ESR1 HNRNPA1 HNRNPD HNRNPK IL7R LINC00941 MIR199A1 MIR363 MIR98 MIRLET7A1 MIRLET7A2 MIRLET7D NCOR1 POLR2A SAFB2 SREK1 SRPK1 SRPK2 SRSF9 SUMO2 TAF15 TJP2	7 interacting genes: ACTG1 ANXA2 ATP5F1A EEF1A2 SAFB SMAD3 TUBB6
Entrez ID		6294	100287314
HPRD ID		04205
Ensembl ID		ENSG00000160633	ENSG00000285517
Uniprot IDs		B7Z2F6 B7ZLP5 Q15424
PDB IDs
Enriched GO Terms of Interacting Partners?		Regulation Of Macromolecule Biosynthetic Process Regulation Of Gene Expression Regulation Of MRNA Metabolic Process Regulation Of Macromolecule Metabolic Process Regulatory NcRNA-mediated Gene Silencing Regulation Of Metabolic Process Regulation Of RNA Splicing MiRNA-mediated Post-transcriptional Gene Silencing Post-transcriptional Regulation Of Gene Expression Regulatory NcRNA-mediated Post-transcriptional Gene Silencing Regulation Of MRNA Processing Post-transcriptional Gene Silencing Regulation Of Primary Metabolic Process Regulation Of Nucleobase-containing Compound Metabolic Process RISC Complex Regulation Of RNA Metabolic Process Negative Regulation Of Macromolecule Biosynthetic Process Regulation Of MRNA Splicing, Via Spliceosome Negative Regulation Of Macromolecule Metabolic Process Negative Regulation Of Biosynthetic Process Negative Regulation Of Gene Expression RNA Splicing MRNA Base-pairing Post-transcriptional Repressor Activity Nucleoplasm Negative Regulation Of Metabolic Process Nucleic Acid Binding RNA Binding MRNA Metabolic Process Chromatin RNA Metabolic Process Positive Regulation Of Metabolic Process Positive Regulation Of Macromolecule Metabolic Process Negative Regulation Of MRNA Metabolic Process Negative Regulation Of Interleukin-6-mediated Signaling Pathway Protein Domain Specific Binding Positive Regulation Of Catabolic Process MRNA 3'-UTR Binding Chromatin Organization Positive Regulation Of Nucleobase-containing Compound Metabolic Process RNA Processing MRNA Processing DNA Binding Positive Regulation Of RNA Metabolic Process Negative Regulation Of Nucleobase-containing Compound Metabolic Process Positive Regulation Of Macromolecule Biosynthetic Process Positive Regulation Of Biosynthetic Process Regulation Of MRNA Stability Nucleus Nucleic Acid Metabolic Process ATP-dependent Chromatin Remodeler Activity	Regulation Of Wound Healing Regulation Of Response To Wounding Regulation Of Cell-substrate Junction Organization Basal Body Patch Protein Kinase Binding Regulation Of Focal Adhesion Assembly Structural Constituent Of Cytoskeleton Regulation Of Stress Fiber Assembly Positive Regulation Of Receptor-mediated Endocytosis Involved In Cholesterol Transport Protease Binding AnxA2-p11 Complex PCSK9-AnxA2 Complex Regulation Of Protein Catabolic Process Negative Regulation Of Wound Healing Negative Regulation Of Low-density Lipoprotein Particle Receptor Catabolic Process Response To Activity Adenyl Ribonucleotide Binding Positive Regulation Of Lipid Kinase Activity Positive Regulation Of Transforming Growth Factor Beta3 Production Negative Regulation Of Lung Blood Pressure Nuclear Mineralocorticoid Receptor Binding Regulation Of Cell-matrix Adhesion Positive Regulation Of Cell Migration Positive Regulation Of Cell Motility Negative Regulation Of Protein Catabolic Process Negative Regulation Of Receptor Catabolic Process Positive Regulation Of Intracellular Cholesterol Transport Sterol Response Element Binding Double-stranded DNA Binding Paraxial Mesoderm Morphogenesis Positive Regulation Of Locomotion Positive Regulation Of Intracellular Transport Regulation Of Transepithelial Transport Positive Regulation Of Low-density Lipoprotein Particle Clearance Positive Regulation Of Plasma Membrane Repair Positive Regulation Of Intracellular Lipid Transport Angiostatin Binding Eukaryotic Translation Elongation Factor 1 Complex Regulation Of Lipid Kinase Activity Regulation Of Lung Blood Pressure Dense Body Myelin Sheath Adaxonal Region Mesoderm Morphogenesis Immune System Development Cell-cell Junction Organization Protein Localization To Bicellular Tight Junction Morphogenesis Of A Polarized Epithelium Midbody Regulation Of Low-density Lipoprotein Particle Receptor Catabolic Process Proton-transporting Two-sector ATPase Complex
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