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RBM22 and RNU6-1
Number of citations of the paper that reports this interaction (PubMedID
22246180
)
60
Data Source:
BioGRID
(unspecified method)
RBM22
RNU6-1
Description
RNA binding motif protein 22
RNA, U6 small nuclear 1
Image
No pdb structure
GO Annotations
Cellular Component
Prp19 Complex
Nucleus
Nucleoplasm
Spliceosomal Complex
Cytoplasm
U2-type Catalytic Step 1 Spliceosome
U2-type Catalytic Step 2 Spliceosome
Catalytic Step 2 Spliceosome
U6 SnRNP
U4/U6 X U5 Tri-snRNP Complex
Molecular Function
Nucleic Acid Binding
RNA Binding
Protein Binding
Zinc Ion Binding
U6 SnRNA Binding
Pre-mRNA Binding
Metal Ion Binding
Calcium-dependent Protein Binding
U4 SnRNA Binding
Biological Process
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
Positive Regulation Of RNA Splicing
Positive Regulation Of Protein Import Into Nucleus
MRNA Cis Splicing, Via Spliceosome
Positive Regulation Of Protein Export From Nucleus
Cellular Response To Xenobiotic Stimulus
Spliceosomal Tri-snRNP Complex Assembly
Formation Of Quadruple SL/U4/U5/U6 SnRNP
Pathways
mRNA Splicing - Major Pathway
Drugs
Diseases
GWAS
Cholangiocarcinoma in primary sclerosing cholangitis (
28779025
)
Crohn's disease (
28067908
)
Inflammatory bowel disease (
28067908
)
Cognitive performance (
20125193
)
Cryptococcosis in HIV infection (
33269293
)
Interacting Genes
45 interacting genes:
AQR
BAG4
BCAS2
BICD2
BMI1
CEBPA
CEP55
CTBP1
CYSRT1
DMRTB1
EIF4ENIF1
ESS2
EXOSC7
EXOSC8
GIGYF1
GOLGA2
HNRNPUL1
HOMER3
HOOK1
KRT31
NCKIPSD
NOA1
NXF1
OGT
PQBP1
PRC1
PRMT2
PRNP
PRPF39
PRPF6
RBFOX2
RBM4
RBPMS
RNU6-1
RNU6-50P
RNU6-6P
SNRPA
SNW1
TFIP11
TXNL4A
VIM
WBP4
YBX2
YTHDF1
YTHDF3
4 interacting genes:
METTL16
RBM22
SND1
USB1
Entrez ID
55696
26827
HPRD ID
10186
Ensembl ID
ENSG00000086589
ENSG00000206625
Uniprot IDs
Q9NW64
PDB IDs
2YTC
5MQF
5XJC
5YZG
5Z56
5Z57
6FF4
6FF7
6ICZ
6ID0
6ID1
6QDV
6ZYM
7A5P
7AAV
7ABG
7ABI
7QTT
7W59
7W5A
7W5B
8C6J
8CH6
8I0P
8I0R
8I0S
8I0T
8I0U
8I0V
8I0W
8RO2
9FMD
Enriched GO Terms of Interacting Partners
?
RNA Splicing
MRNA Metabolic Process
MRNA Processing
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
RNA Processing
Spliceosomal Complex
RNA Binding
RNA Metabolic Process
Catalytic Step 2 Spliceosome
Regulation Of MRNA Metabolic Process
Cytoplasmic Stress Granule
MRNA Binding
Nuclear Speck
Nucleic Acid Metabolic Process
U4/U6 X U5 Tri-snRNP Complex
Membraneless Organelle Assembly
U5 SnRNA 3'-end Processing
U1 SnRNA 3'-end Processing
Nucleus
Identical Protein Binding
Alternative MRNA Splicing, Via Spliceosome
Negative Regulation Of Metabolic Process
Nucleobase-containing Compound Metabolic Process
Nucleoplasm
U2-type Catalytic Step 2 Spliceosome
Cellular Component Assembly
Exoribonuclease Complex
Regulation Of RNA Splicing
Nucleic Acid Binding
P-body
Exonucleolytic Trimming To Generate Mature 3'-end Of 5.8S RRNA From Tricistronic RRNA Transcript (SSU-rRNA, 5.8S RRNA, LSU-rRNA)
TRAMP-dependent TRNA Surveillance Pathway
TRNA Surveillance
Nuclear Polyadenylation-dependent RRNA Catabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Regulation Of Translational Initiation
U4 SnRNA 3'-end Processing
Regulation Of Long-term Synaptic Potentiation
Regulation Of MRNA Splicing, Via Spliceosome
Positive Regulation Of Translational Initiation
Memory
RRNA 3'-end Processing
Nucleolar Exosome (RNase Complex)
U2-type Precatalytic Spliceosome
TRNA Decay
Nuclear MRNA Surveillance
Negative Regulation Of Macromolecule Biosynthetic Process
Regulation Of MRNA Processing
Pre-mRNA Intronic Binding
RNA Metabolic Process
SnRNA Processing
SnRNA Metabolic Process
RNAi Effector Complex
Nucleic Acid Metabolic Process
MRNA Metabolic Process
SnRNA (adenine-N6)-methylation
U6 SnRNA (adenine-(43)-N(6))-methyltransferase Activity
Poly(U)-specific Exoribonuclease Activity, Producing 3' Uridine Cyclic Phosphate Ends
Nuclease Activity
MRNA Catabolic Process
Nucleobase-containing Compound Metabolic Process
RNA Processing
U6 SnRNA 3'-end Binding
U6 SnRNA 3'-end Processing
Regulation Of RNA Splicing
MRNA M(6)A Methyltransferase Activity
RNA Catabolic Process
S-adenosylmethionine Biosynthetic Process
RISC Complex Binding
Dense Body
SnRNA Modification
Negative Regulation Of 3'-UTR-mediated MRNA Stabilization
RRNA Base Methylation
RNA Binding
Nucleobase-containing Compound Catabolic Process
MiRNA Catabolic Process
RNA Splicing
U2-type Catalytic Step 1 Spliceosome
S-adenosylmethionine Metabolic Process
U6 SnRNA Binding
Prp19 Complex
MRNA Cis Splicing, Via Spliceosome
MRNA Processing
RNA Stem-loop Binding
Pre-mRNA Binding
Positive Regulation Of Protein Export From Nucleus
MiRNA Metabolic Process
RRNA Methylation
SnRNA 3'-end Processing
Macromolecule Metabolic Process
Nucleic Acid Binding
U2-type Catalytic Step 2 Spliceosome
3'-5'-RNA Exonuclease Activity
RRNA Modification
RNA Endonuclease Activity
Regulation Of Protein Export From Nucleus
Positive Regulation Of Protein Import Into Nucleus
Positive Regulation Of RNA Splicing
Regulation Of Protein Import Into Nucleus
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Tagcloud (Intersection)
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