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RBM22 and RNU6-50P
Number of citations of the paper that reports this interaction (PubMedID
22246180
)
60
Data Source:
BioGRID
(unspecified method)
RBM22
RNU6-50P
Description
RNA binding motif protein 22
RNA, U6 small nuclear 50, pseudogene
Image
No pdb structure
GO Annotations
Cellular Component
Prp19 Complex
Nucleus
Nucleoplasm
Spliceosomal Complex
Cytoplasm
U2-type Catalytic Step 1 Spliceosome
U2-type Catalytic Step 2 Spliceosome
Catalytic Step 2 Spliceosome
Molecular Function
Nucleic Acid Binding
RNA Binding
Protein Binding
Zinc Ion Binding
U6 SnRNA Binding
Pre-mRNA Binding
Metal Ion Binding
Calcium-dependent Protein Binding
Biological Process
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
Positive Regulation Of RNA Splicing
Positive Regulation Of Protein Import Into Nucleus
MRNA Cis Splicing, Via Spliceosome
Positive Regulation Of Protein Export From Nucleus
Cellular Response To Xenobiotic Stimulus
Pathways
mRNA Splicing - Major Pathway
Drugs
Diseases
GWAS
Cholangiocarcinoma in primary sclerosing cholangitis (
28779025
)
Crohn's disease (
28067908
)
Inflammatory bowel disease (
28067908
)
Interacting Genes
45 interacting genes:
AQR
BAG4
BCAS2
BICD2
BMI1
CEBPA
CEP55
CTBP1
CYSRT1
DMRTB1
EIF4ENIF1
ESS2
EXOSC7
EXOSC8
GIGYF1
GOLGA2
HNRNPUL1
HOMER3
HOOK1
KRT31
NCKIPSD
NOA1
NXF1
OGT
PQBP1
PRC1
PRMT2
PRNP
PRPF39
PRPF6
RBFOX2
RBM4
RBPMS
RNU6-1
RNU6-50P
RNU6-6P
SNRPA
SNW1
TFIP11
TXNL4A
VIM
WBP4
YBX2
YTHDF1
YTHDF3
1 interacting genes:
RBM22
Entrez ID
55696
26825
HPRD ID
10186
Ensembl ID
ENSG00000086589
Uniprot IDs
Q9NW64
PDB IDs
2YTC
5MQF
5XJC
5YZG
5Z56
5Z57
6FF4
6FF7
6ICZ
6ID0
6ID1
6QDV
6ZYM
7A5P
7AAV
7ABG
7ABI
7QTT
7W59
7W5A
7W5B
8C6J
8CH6
8I0P
8I0R
8I0S
8I0T
8I0U
8I0V
8I0W
8RO2
9FMD
Enriched GO Terms of Interacting Partners
?
RNA Splicing
MRNA Metabolic Process
MRNA Processing
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
RNA Processing
Spliceosomal Complex
RNA Binding
RNA Metabolic Process
Catalytic Step 2 Spliceosome
Regulation Of MRNA Metabolic Process
Cytoplasmic Stress Granule
MRNA Binding
Nuclear Speck
Nucleic Acid Metabolic Process
U4/U6 X U5 Tri-snRNP Complex
Membraneless Organelle Assembly
U5 SnRNA 3'-end Processing
U1 SnRNA 3'-end Processing
Nucleus
Identical Protein Binding
Alternative MRNA Splicing, Via Spliceosome
Negative Regulation Of Metabolic Process
Nucleobase-containing Compound Metabolic Process
Nucleoplasm
U2-type Catalytic Step 2 Spliceosome
Cellular Component Assembly
Exoribonuclease Complex
Regulation Of RNA Splicing
Nucleic Acid Binding
P-body
Exonucleolytic Trimming To Generate Mature 3'-end Of 5.8S RRNA From Tricistronic RRNA Transcript (SSU-rRNA, 5.8S RRNA, LSU-rRNA)
TRAMP-dependent TRNA Surveillance Pathway
TRNA Surveillance
Nuclear Polyadenylation-dependent RRNA Catabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Regulation Of Translational Initiation
U4 SnRNA 3'-end Processing
Regulation Of Long-term Synaptic Potentiation
Regulation Of MRNA Splicing, Via Spliceosome
Positive Regulation Of Translational Initiation
Memory
RRNA 3'-end Processing
Nucleolar Exosome (RNase Complex)
U2-type Precatalytic Spliceosome
TRNA Decay
Nuclear MRNA Surveillance
Negative Regulation Of Macromolecule Biosynthetic Process
Regulation Of MRNA Processing
Pre-mRNA Intronic Binding
Prp19 Complex
U2-type Catalytic Step 1 Spliceosome
Pre-mRNA Binding
U6 SnRNA Binding
MRNA Cis Splicing, Via Spliceosome
Positive Regulation Of Protein Export From Nucleus
U2-type Catalytic Step 2 Spliceosome
Positive Regulation Of RNA Splicing
Regulation Of Protein Export From Nucleus
Positive Regulation Of Protein Import Into Nucleus
Regulation Of Protein Import Into Nucleus
Cellular Response To Xenobiotic Stimulus
Positive Regulation Of Nucleocytoplasmic Transport
Calcium-dependent Protein Binding
Positive Regulation Of Intracellular Protein Transport
Catalytic Step 2 Spliceosome
Positive Regulation Of Protein Localization To Nucleus
Regulation Of Nucleocytoplasmic Transport
Positive Regulation Of Intracellular Transport
Regulation Of Intracellular Protein Transport
Regulation Of Protein Localization To Nucleus
Spliceosomal Complex
Regulation Of RNA Splicing
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Positive Regulation Of Protein Transport
Regulation Of Intracellular Transport
Response To Xenobiotic Stimulus
Positive Regulation Of Establishment Of Protein Localization
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Tagcloud (Intersection)
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