MIR16-2 and RBMS1

Number of citations of the paper that reports this interaction (PubMedID 28431233)
0

Data Source:
BioGRID (unspecified method)

		MIR16-2	RBMS1
Description		microRNA 16-2	RNA binding motif single stranded interacting protein 1
Image		No pdb structure
GO Annotations	Cellular Component	Extracellular Space RISC Complex	Nucleus Cytosol Ribonucleoprotein Complex
	Molecular Function		Nucleic Acid Binding DNA Binding Double-stranded DNA Binding Single-stranded DNA Binding RNA Binding MRNA 3'-UTR Binding Protein Binding Poly(A) Binding Poly(U) RNA Binding
	Biological Process	MiRNA-mediated Post-transcriptional Gene Silencing	DNA Replication RNA Processing
Pathways
Drugs
Diseases
GWAS		Bipolar disorder ( 31043756) Malaria ( 31844061)	A body shape index ( 34021172) Adult body size ( 32376654) Age at first sexual intercourse ( 34211149) Amyotrophic lateral sclerosis ( 19451621) Basal cell carcinoma ( 31174203) Body size at age 10 ( 32376654) Chronotype ( 30696823) FEV1 ( 30804560) Gut microbiota relative abundance (Ruminococcus belonging to family Lachnospiraceae) ( 33208821) HDL cholesterol levels ( 32203549) High light scatter reticulocyte count ( 32888494) High light scatter reticulocyte percentage of red cells ( 32888494) Hip circumference adjusted for BMI ( 34021172) Idiopathic membranous nephropathy ( 21323541) Intelligence (MTAG) ( 29326435) Lung function (FVC) ( 30804560) Lymphocyte count ( 27863252 32888494) Lymphocyte percentage of white cells ( 27863252 32888494) Monocyte percentage of white cells ( 27863252 32888494) Neutrophil count ( 32888494) Neutrophil percentage of white cells ( 32888494) Peak expiratory flow ( 30804560) Refractive error ( 32231278) Reticulocyte count ( 32888494) Reticulocyte fraction of red cells ( 32888494) Systolic blood pressure ( 30224653) Tourette syndrome ( 30818990) Triglyceride levels ( 32203549) Type 2 diabetes ( 20418489 30297969 30054458 29358691 22885922) Waist circumference adjusted for body mass index ( 34021172) Weight ( 31647587 28552196) White blood cell count ( 32888494 27863252)
Interacting Genes		83 interacting genes: ADARB1 APOBEC3B ATXN2L C1QBP CPSF1 CRTAP DARS1 DDX1 DDX21 DDX3X DHX36 DHX37 EIF2AK2 EPRS1 ERAL1 FAM98A FIP1L1 FUS G3BP2 HARS2 HNRNPA0 HNRNPA1 HNRNPA2B1 HNRNPA3 HNRNPF HNRNPH1 HNRNPH2 HNRNPH3 HNRNPK HNRNPL HNRNPM HNRNPR IARS1 IGF2BP1 IGF2BP2 IGF2BP3 KARS1 LARP7 LIN28A LRPPRC MARS1 MATR3 MSI2 NOL6 NONO NUDT21 PDCD11 PRMT1 PTBP1 PTBP3 PUF60 PURA QARS1 RARS1 RBFOX2 RBM14 RBM4 RBMS1 RBMS2 RTCA RTCB SF3B1 SF3B2 SF3B3 SF3B4 SFPQ STRBP SUGP2 SYMPK SYNCRIP TAF15 TRA2A TRA2B TRIM25 UPF1 UTP20 YBX1 YBX2 YBX3 ZC3H7A ZC3H7B ZFR ZNF346	10 interacting genes: MIR16-2 MIR205 MIR29A MIR7-1 MIR92A2 MIR93 MIRLET7G OGT POLA1 TFCP2
Entrez ID		406951	5937
HPRD ID			03814
Ensembl ID		ENSG00000198987	ENSG00000153250
Uniprot IDs			A0A0S2Z499 P29558
PDB IDs			1X5O 6M75 7C36
Enriched GO Terms of Interacting Partners?		RNA Binding Nucleic Acid Binding RNA Processing RNA Metabolic Process Nucleic Acid Metabolic Process MRNA Processing RNA Splicing MRNA Metabolic Process Nucleobase-containing Compound Metabolic Process MRNA Binding Nucleus Macromolecule Metabolic Process Regulation Of MRNA Metabolic Process Regulation Of RNA Splicing MRNA Splicing, Via Spliceosome Ribonucleoprotein Complex Post-transcriptional Regulation Of Gene Expression RNA Splicing, Via Transesterification Reactions Nucleoplasm Spliceosomal Complex Cytoplasmic Stress Granule MiRNA Binding MRNA 3'-UTR Binding Negative Regulation Of MRNA Metabolic Process Regulation Of MRNA Processing Regulation Of Translation Regulation Of MRNA Splicing, Via Spliceosome Catalytic Step 2 Spliceosome Aminoacyl-tRNA Synthetase Multienzyme Complex Negative Regulation Of RNA Catabolic Process Regulation Of Gene Expression Negative Regulation Of MRNA Catabolic Process Negative Regulation Of Translation RNA Stabilization Regulation Of Macromolecule Biosynthetic Process TRNA Aminoacylation For Protein Translation Aminoacyl-tRNA Ligase Activity Ligase Activity TRNA Aminoacylation Regulation Of Macromolecule Metabolic Process MRNA Stabilization Positive Regulation Of Cytoplasmic Translation Regulation Of Primary Metabolic Process CRD-mediated MRNA Stabilization Regulation Of Metabolic Process MRNA 5'-UTR Binding Regulation Of Alternative MRNA Splicing, Via Spliceosome Positive Regulation Of Gene Expression Negative Regulation Of Macromolecule Metabolic Process TRNA Metabolic Process	RISC Complex MiRNA-mediated Post-transcriptional Gene Silencing Regulatory NcRNA-mediated Post-transcriptional Gene Silencing Post-transcriptional Gene Silencing Regulatory NcRNA-mediated Gene Silencing Post-transcriptional Regulation Of Gene Expression Negative Regulation Of Gene Expression MRNA Base-pairing Post-transcriptional Repressor Activity Negative Regulation Of Cell Migration Negative Regulation Of Cell Motility Negative Regulation Of Locomotion Negative Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway Regulation Of Gene Expression Negative Regulation Of Macromolecule Biosynthetic Process Regulation Of Macromolecule Biosynthetic Process Negative Regulation Of Biosynthetic Process Negative Regulation Of Macromolecule Metabolic Process Regulation Of Macromolecule Metabolic Process Negative Regulation Of Metabolic Process Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway Regulation Of Metabolic Process Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway Negative Regulation Of Vascular Endothelial Growth Factor Production MRNA 3'-UTR Binding Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway Regulation Of Cell Migration Negative Regulation Of SMAD Protein Signal Transduction Negative Regulation Of Translation Regulation Of Cell Motility Regulation Of Locomotion Regulation Of Vascular Endothelial Growth Factor Production MiRNA-mediated Gene Silencing By Inhibition Of Translation Protein N-acetylglucosaminyltransferase Complex Negative Regulation Of Non-canonical Inflammasome Complex Assembly Cellular Response To Glucose Stimulus Negative Regulation Of Osteoblast Differentiation Negative Regulation Of Signal Transduction Regulation Of SMAD Protein Signal Transduction Regulation Of Angiogenesis Regulation Of Vasculature Development Regulation Of Cellular Response To Growth Factor Stimulus Cellular Response To Carbohydrate Stimulus Extracellular Space Negative Regulation Of Cell Communication Negative Regulation Of Signaling Intracellular Glucose Homeostasis Extracellular Vesicle Negative Regulation Of Developmental Process Regulation Of Translation Lagging Strand Elongation
Tagcloud ?
Tagcloud (Difference) ?
Tagcloud (Intersection) ?