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SYNE1 and ZC3H12D
SYNE1
ZC3H12D
Description
spectrin repeat containing nuclear envelope protein 1
zinc finger CCCH-type containing 12D
Image
No pdb structure
GO Annotations
Cellular Component
P-body
Nucleus
Nuclear Envelope
Nuclear Outer Membrane
Nucleoplasm
Nucleolus
Cytoplasm
Golgi Apparatus
Cytoskeleton
Membrane
Sarcomere
Nuclear Membrane
Meiotic Nuclear Membrane Microtubule Tethering Complex
Postsynaptic Membrane
P-body
Nucleus
Nucleoplasm
Cytoplasm
Cytoplasmic Ribonucleoprotein Granule
Molecular Function
RNA Binding
Actin Binding
Protein Binding
Lamin Binding
Enzyme Binding
Identical Protein Binding
Protein Homodimerization Activity
Actin Filament Binding
Cytoskeleton-nuclear Membrane Anchor Activity
MRNA Binding
Nuclease Activity
Endonuclease Activity
RNA Endonuclease Activity
Protein Binding
Zinc Ion Binding
Hydrolase Activity
Metal Ion Binding
Biological Process
Nucleus Organization
Golgi Organization
Spermatogenesis
Cell Differentiation
Muscle Cell Differentiation
Nuclear Matrix Anchoring At Nuclear Membrane
Negative Regulation Of Cell Growth
3'-UTR-mediated MRNA Destabilization
Negative Regulation Of G1/S Transition Of Mitotic Cell Cycle
Pathways
Meiotic synapsis
Drugs
Diseases
Spinocerebellar ataxia (SCA); Machado-Joseph disease (SCA3)
Emery-Dreifuss muscular dystrophy
GWAS
Appendicular lean mass (
33097823
)
Autism spectrum disorder, attention deficit-hyperactivity disorder, bipolar disorder, major depressive disorder, and schizophrenia (combined) (
23453885
)
Bipolar disorder (
20351715
21738484
21926972
34002096
28072414
28115744
31043756
)
Bipolar disorder or major depressive disorder (
20351715
)
Bipolar I disorder (
31043756
)
Body mass index (
26426971
)
Endometriosis (
28537267
)
Femur bone mineral density x serum urate levels interaction (
34046847
)
Heel bone mineral density (
30598549
28869591
)
Hip circumference adjusted for BMI (
34021172
)
Post bronchodilator FEV1 (
26634245
)
Tonometry (
17903302
)
Uterine fibroids (
30194396
31249589
31649266
)
Asthma (
32296059
)
Dupuytren's disease (
21732829
28886342
)
Eosinophil count (
32888494
)
Eosinophil percentage of white cells (
32888494
)
Interacting Genes
28 interacting genes:
ACTC1
APC
BDKRB2
BTG3
CAPN1
CDC42
CDC5L
CEP63
DISC1
DSCAM
DSCR9
DTNBP1
ECPAS
EMD
ITSN1
LINC00839
LMNA
MTDH
MUSK
MYOM1
NDEL1
PCNT
SH3BP5
TNIK
TP53RK
USP21
USP7
XIAP
1 interacting genes:
ZC3H12A
Entrez ID
23345
340152
HPRD ID
09762
19272
Ensembl ID
ENSG00000131018
ENSG00000178199
Uniprot IDs
A0A0C4DG40
B4E3R1
B7Z9Y6
F8WAI0
Q8NF91
A2A288
PDB IDs
4DXR
6R15
6XF2
Enriched GO Terms of Interacting Partners
?
Antigen Processing And Presentation Of Endogenous Peptide Antigen Via MHC Class I Via ER Pathway, TAP-independent
Antigen Processing And Presentation Of Endogenous Peptide Antigen Via MHC Class Ib
Antigen Processing And Presentation Of Endogenous Peptide Antigen Via MHC Class I
Antigen Processing And Presentation Of Endogenous Antigen
Natural Killer Cell Lectin-like Receptor Binding
Positive Regulation Of T Cell Mediated Cytotoxicity
Antigen Processing And Presentation Of Peptide Antigen Via MHC Class I
Regulation Of T Cell Mediated Cytotoxicity
Signal Transduction
Antigen Processing And Presentation Of Peptide Antigen
Positive Regulation Of Leukocyte Mediated Cytotoxicity
Regulation Of Postsynapse Organization
Positive Regulation Of Cell Killing
Positive Regulation Of T Cell Mediated Immunity
Cytoskeleton Organization
Regulation Of Synapse Organization
Microtubule Organizing Center
Molecular Adaptor Activity
Regulation Of Leukocyte Mediated Cytotoxicity
Radial Glia-guided Pyramidal Neuron Migration
Antigen Processing And Presentation
Centrosome
Regulation Of T Cell Mediated Immunity
Intracellular Signal Transduction
Natural Killer Cell Mediated Cytotoxicity
Negative Regulation Of Cell Cycle
Natural Killer Cell Mediated Immunity
Positive Regulation Of Plasma Membrane Bounded Cell Projection Assembly
Positive Regulation Of Cell Projection Organization
Negative Regulation Of Cyclin-dependent Protein Serine/threonine Kinase Activity
Positive Regulation Of Adaptive Immune Response Based On Somatic Recombination Of Immune Receptors Built From Immunoglobulin Superfamily Domains
Leading Edge Membrane
Positive Regulation Of Lymphocyte Mediated Immunity
Glutamatergic Synapse
Regulation Of Dendritic Spine Development
Positive Regulation Of Adaptive Immune Response
Negative Regulation Of Cyclin-dependent Protein Kinase Activity
Cytoskeleton
Neuron Projection Morphogenesis
Cytosol
Wnt Signaling Pathway
Positive Regulation Of Pseudopodium Assembly
Cell Projection Morphogenesis
Regulation Of Plasma Membrane Bounded Cell Projection Organization
Leukocyte Mediated Cytotoxicity
Regulation Of Cell Projection Organization
Positive Regulation Of Cellular Component Organization
Regulation Of Wnt Signaling Pathway
Cerebral Cortex Radially Oriented Cell Migration
Regulation Of Protein Localization
P-body
Nuclear Matrix Organization
Cytoskeleton-nuclear Membrane Anchor Activity
Nuclear Matrix Anchoring At Nuclear Membrane
Cellular Response To Sodium Arsenite
Positive Regulation Of Protein Deubiquitination
Cellular Response To Salt
Response To Sodium Arsenite
Positive Regulation Of MiRNA Catabolic Process
Negative Regulation Of Cardiac Muscle Contraction
Cellular Response To Ionomycin
Meiotic Nuclear Membrane Microtubule Tethering Complex
Lamin Binding
Regulation Of Protein Deubiquitination
Negative Regulation Of Nitric Oxide Biosynthetic Process
Negative Regulation Of T-helper 17 Cell Differentiation
Cellular Response To Chemokine
Rough Endoplasmic Reticulum Membrane
Negative Regulation Of Macrophage Activation
Host-mediated Suppression Of Viral Genome Replication
RNA Stem-loop Binding
Negative Regulation Of Striated Muscle Contraction
MiRNA Catabolic Process
RNA Exonuclease Activity
Cellular Response To Arsenic-containing Substance
Cellular Response To Ether
Negative Regulation Of T-helper 17 Type Immune Response
3'-UTR-mediated MRNA Destabilization
Negative Regulation Of Heart Contraction
Positive Regulation Of Execution Phase Of Apoptosis
Positive Regulation Of Lipid Storage
Negative Regulation Of T-helper Cell Differentiation
Negative Regulation Of Muscle Contraction
Negative Regulation Of Blood Circulation
MiRNA Metabolic Process
Response To Ether
Response To Salt
Maintenance Of Protein Location In Nucleus
Negative Regulation Of CD4-positive, Alpha-beta T Cell Differentiation
Positive Regulation Of P38MAPK Cascade
Regulation Of T-helper 17 Cell Differentiation
MRNA 3'-UTR AU-rich Region Binding
RNA Nuclease Activity
Response To Arsenic-containing Substance
Negative Regulation Of Alpha-beta T Cell Differentiation
Nuclear Outer Membrane
Negative Regulation Of Interleukin-1 Beta Production
Positive Regulation Of Defense Response To Virus By Host
Negative Regulation Of Non-canonical NF-kappaB Signal Transduction
Negative Regulation Of Interleukin-1 Production
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