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SDCBP and PRPF40A
Data Source:
BioGRID
(two hybrid)
SDCBP
PRPF40A
Description
syndecan binding protein
pre-mRNA processing factor 40 homolog A
Image
GO Annotations
Cellular Component
Extracellular Region
Extracellular Space
Nucleus
Nucleoplasm
Cytoplasm
Endoplasmic Reticulum Membrane
Cytosol
Cytoskeleton
Plasma Membrane
Interleukin-5 Receptor Complex
Adherens Junction
Focal Adhesion
Membrane
Nuclear Membrane
Azurophil Granule Lumen
Melanosome
Membrane Raft
Synapse
Extracellular Exosome
Blood Microparticle
Extracellular Vesicle
Nucleoplasm
U1 SnRNP
Membrane
Nuclear Matrix
Nuclear Speck
U2-type Prespliceosome
Molecular Function
Frizzled Binding
Interleukin-5 Receptor Binding
Protein Binding
Phosphatidylinositol-4,5-bisphosphate Binding
Cytoskeletal Anchor Activity
Identical Protein Binding
Syndecan Binding
Protein Heterodimerization Activity
Protein N-terminus Binding
RNA Binding
Protein Binding
Biological Process
Negative Regulation Of Receptor Internalization
Protein Targeting To Membrane
Substrate-dependent Cell Migration, Cell Extension
Chemical Synaptic Transmission
Regulation Of Mitotic Cell Cycle
Positive Regulation Of Cell Population Proliferation
Positive Regulation Of Epithelial To Mesenchymal Transition
Positive Regulation Of Pathway-restricted SMAD Protein Phosphorylation
Actin Cytoskeleton Organization
Positive Regulation Of Cell Growth
Positive Regulation Of Cell Migration
Positive Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Negative Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process
Intracellular Signal Transduction
Positive Regulation Of Phosphorylation
Neutrophil Degranulation
Positive Regulation Of JNK Cascade
Ephrin Receptor Signaling Pathway
Positive Regulation Of Exosomal Secretion
Positive Regulation Of Extracellular Exosome Assembly
MRNA Splicing, Via Spliceosome
Cytoskeleton Organization
Cell Cycle
Regulation Of Cell Shape
Cell Migration
Regulation Of Cytokinesis
MRNA Cis Splicing, Via Spliceosome
Cell Division
Pathways
Ephrin signaling
Neurofascin interactions
RIPK1-mediated regulated necrosis
Regulation of necroptotic cell death
Neutrophil degranulation
mRNA Splicing - Major Pathway
Drugs
Diseases
GWAS
Low density lipoprotein cholesterol levels (
32154731
)
Lymphocyte counts (
32888494
)
Monocyte count (
32888494
)
Triglyceride levels (
32154731
)
Heel bone mineral density (
30598549
)
Memory dysfunction in frontotemporal lobe dementia (
29724592
)
Metabolite levels (
23823483
)
Pulse pressure (
30224653
)
Refractive error (
32231278
)
Interacting Genes
307 interacting genes:
ABI2
ANKRD33
ANKRD36B
ANKRD40
ANP32B
APIP
ARFIP2
ARL6IP1
BCL2L15
BEND7
C11orf68
C1orf109
C1orf35
C2CD2L
CABP5
CADM1
CADPS
CALCOCO2
CALM1
CALM2
CALM3
CAV2
CBR3
CBY2
CCDC102B
CCDC106
CD6
CD63
CDA
CDC34
CDCP1
CDIPT
CDKN2D
CEP55
CEP85
CGGBP1
CHIC2
CHMP1A
CLK2
CLK3
CMTM5
COX4I1
CRX
CRYAA
CRYAA2
CT45A1
CT45A10
CT45A3
CT45A5
CTBP2
CTDSP1
CUTC
CYHR1
DCTD
DCTPP1
DDX39B
DERL3
DMC1
DNM2
DRAP1
DTNBP1
DYNLT1
EAF1
EDARADD
EFNB1
EFNB2
EIF1AD
EIF5A
EIF5A2
ELAVL1
EMILIN3
ENOX1
ENTR1
EPHB2
ERICH2
EXOSC4
FADD
FAM118A
FAM118B
FAM9A
FAM9B
FHL3
FHL5
FLAD1
FOXP2
FTH1
FTL
GET4
GGPS1
GKAP1
GNMT
GOLT1B
GPATCH11
GPR37
GRIA1
GRIA2
GRIA3
GRIA4
GRIK1
GRIK2
GRM2
GRM3
GRM7
GRXCR1
GSC2
GSG1
HEXIM2
HHAT
HIVEP1
HMBOX1
HMGB3
HNRNPC
HOMER3
HOMEZ
HOXA1
HOXA7
HPRT1
HSBP1
HSF2BP
HUS1
ID3
IGFBP6
IHO1
IKZF1
IL5RA
INO80E
KATNBL1
KCNH1
KCNJ2
KCTD1
KCTD6
KCTD9
KHDRBS2
KLHL12
KLHL2
KRT14
KRTAP1-3
KRTAP1-5
KRTAP10-3
KRTAP10-7
KRTAP5-9
LDB2
LDHB
LDOC1
LEPROTL1
LGALS2
LSM6
LURAP1L
LZTFL1
MAD2L1
MAPK9
MAPRE3
MATN4
MBD3
MED4
MEOX1
MEOX2
MGLL
MID2
MINDY3
MKRN1
MOBP
MRFAP1
MRFAP1L1
MTUS2
MYBPC2
MYLIP
N4BP3
NADK
NAGK
NAPB
NECAB2
NF2
NFASC
NKAPD1
NOTCH2NLA
NT5C2
OCM
ODAM
OPTN
OSTF1
PCBD1
PCYT1A
PDCD6IP
PDE4DIP
PDE9A
PDLIM4
PDZK1IP1
PFDN5
PHC2
PHF11
PIH1D2
PNMA1
PNMA2
POLR2J
POLR3K
PPARA
PRPF38A
PRPF40A
PRR13
PSMB3
PSMC6
PSME2
PSTPIP1
PTEN
PTPRJ
PTS
PUF60
PYCR3
RAB5A
RALY
RBM39
REEP6
REL
RIC8A
RNF11
RNH1
ROPN1
RP9
RP9P
RPIA
RPL22
RPRD1A
RPRM
RPS26
RRM2
RRS1
RTL8B
RTN1
RUNDC3A
S100B
SCG3
SCML1
SDC1
SDC2
SDC4
SDCBP2
SEPTIN1
SEPTIN3
SET
SFT2D1
SIAH1
SLC50A1
SLC6A5
SMARCA2
SNRPA
SNX1
SOX4
SPANXN3
SREK1IP1
SRSF11
SRSF3
SRSF7
SSC5D
SSNA1
STX1A
SUB1
SULT1B1
SYNGR1
SYPL1
SYS1
TCF21
TCF4
TDO2
TEKT1
TFCP2
TGFA
THG1L
TIFA
TKFC
TLE5
TMCO2
TMEM17
TMEM239
TNFAIP8
TNFAIP8L3
TNKS
TRAF5
TRARG1
TRIM27
TRIM32
TRIM38
TRIM54
TRIP13
TSN
UBB
UBC
UBE2A
UBE2K
UBE2R2
ULK1
WASHC1
WASHC3
WASL
WDR91
YIF1A
ZBTB14
ZBTB8A
ZCCHC10
ZCCHC17
ZMYND12
ZNF343
ZNF485
ZNF660
ZNF768
ZRANB1
ZSCAN23
130 interacting genes:
ABI1
AKAP8L
APBB1IP
ARFGEF2
ASXL2
ATAD3A
BAG6
BEND7
BRD4
C4orf45
CAP2
CCNL1
CCT2
CCT4
CCT7
CDK12
CDK13
CHD3
CHERP
CPSF6
CT45A1
CUL1
CYFIP1
CYFIP2
DAAM1
DDIT4L
DHX15
DHX8
DHX9
DIAPH1
DZIP1
DZIP1L
ENAH
ERG
EVL
FASLG
FMN1
FMNL1
FMNL2
FMNL3
FN1
FNBP4
FRA10AC1
GAPDH
HIPK1
HNRNPF
HNRNPK
HNRNPU
HNRNPUL1
HSPB1
HSPG2
HTT
IL1RAP
KMT2B
LARP7
LTBP3
MAP1LC3A
MECP2
MMP11
NCKAP1L
NKAP
NKAPD1
NONO
PCBP2
PDCD7
PECAM1
PFKL
PIAS1
PIAS3
PIAS4
PICK1
PPIG
PRKAR1A
PSG5
PTPRF
RBM39
RBMX2
RCC2
RLF
RPL4
RPLP0
SDCBP
SDCBP2
SDK1
SERPINB9
SF1
SF3A1
SF3A2
SF3A3
SF3B1
SF3B2
SF3B3
SF3B4
SFPQ
SMAD4
SNIP1
SNRNP70
SON
SREK1
SREK1IP1
SRPK2
STIM2
TCEAL9
U2AF1
U2AF2
U2SURP
UBE2I
UBE2K
UBQLN1
UBQLN2
UBQLN4
UBR4
VASP
VCL
WAS
WASF2
WASL
WBP11
WBP4
WIPF1
XRCC6
YBX1
YLPM1
YWHAG
ZCCHC10
ZCCHC8
ZFHX3
ZHX1
ZNF341
ZNF451
Entrez ID
6386
55660
HPRD ID
03741
10995
Ensembl ID
ENSG00000137575
ENSG00000196504
Uniprot IDs
A0A024R7Z5
B4DHN5
G5EA09
O00560
O75400
PDB IDs
1N99
1NTE
1OBX
1OBY
1OBZ
1R6J
1V1T
1W9E
1W9O
1W9Q
1YBO
4Z33
1UZC
1YWI
1YWJ
1ZR7
2CQN
2DYF
2KZG
2L5F
2L9V
2LKS
Enriched GO Terms of Interacting Partners
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