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TRIM54 and LMO1
Data Source:
BioGRID
(two hybrid)
TRIM54
LMO1
Description
tripartite motif containing 54
LIM domain only 1
Image
No pdb structure
GO Annotations
Cellular Component
Cytoplasm
Microtubule
Microtubule Associated Complex
Z Disc
Nucleus
Nucleoplasm
Molecular Function
Protein Binding
Microtubule Binding
Zinc Ion Binding
Ubiquitin Protein Ligase Activity
Protein Binding
Metal Ion Binding
Biological Process
Microtubule-based Process
Negative Regulation Of Microtubule Depolymerization
Signal Transduction
Multicellular Organism Development
Protein Ubiquitination
Cell Differentiation
Negative Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Transcription By RNA Polymerase II
Regulation Of T Cell Homeostatic Proliferation
Regulation Of Hematopoietic Stem Cell Differentiation
Pathways
RUNX1 regulates transcription of genes involved in differentiation of HSCs
Drugs
Diseases
GWAS
Mean corpuscular hemoglobin (
32888494
)
Alcohol consumption (
23743675
)
Body mass index (
31888951
26426971
28892062
)
Body mass index (age <50) (
26426971
)
Body mass index x sex x age interaction (4df test) (
26426971
)
Diastolic blood pressure (
27618447
)
Fasting blood glucose (
22581228
)
Fasting blood glucose (BMI interaction) (
22581228
)
Height (
31562340
)
Malaria (
31844061
)
Neuroblastoma (
22941191
21124317
)
Offspring birth weight (
31043758
)
Response to fenofibrate (HDL cholesterol levels) (
27002377
)
Sporadic neuroblastoma (
28545128
)
Systolic blood pressure (
27618447
)
Interacting Genes
317 interacting genes:
AAMDC
ABHD17C
ADCY4
AGFG1
AIFM2
AK2
AK3
ANKRD11
ANKRD45
ARFIP2
ARHGAP29
ARHGEF5
ARHGEF6
ARMC7
ATXN3
ATXN3L
ATXN7
BBX
BMF
BSCL2
BYSL
C14orf39
C1orf109
C1orf216
C1orf35
C1QTNF2
C2CD6
C2orf49
C8orf74
CALM3
CARD9
CAVIN2
CBX8
CCDC102B
CCDC146
CCDC17
CCDC26
CCDC28A
CCDC87
CCHCR1
CCNC
CDC37
CDK18
CDKAL1
CDKN1A
CENPX
CEP57L1
CEP68
CFAP100
CFAP206
CFAP53
CHCHD2
CHD2
CHD3
CKM
CLPP
CMIP
CNGA3
CRADD
CSNK2B
CTNNA3
CWF19L2
CYTH4
DAXX
DCAF8
DCLRE1B
DCUN1D1
DDX6
DEUP1
DNAL4
DNASE1L1
DPYSL4
DRG2
DTNB
DTX2
DUSP16
DVL3
DYNC2I2
DYNLL1
EHHADH
EIF4E2
ELMO1
ELOA
ENKD1
EPHB2
EPM2AIP1
EXOC7
EXOC8
EXOSC5
EXTL2
FAM110A
FAM124A
FAM124B
FAM161A
FAM50B
FAM90A1
FAM9A
FARS2
FBF1
FBXO16
FBXW2
FLNC
FMNL1
G2E3
GAS8
GEM
GIMAP2
GLP2R
GMCL1
GNG13
GNL3L
GTF2I
GTF2IRD2
GTF2IRD2B
HAUS1
HBG1
HDAC10
HGS
HMMR
HOXB5
HSF2
HSPB1
HYAL2
IL18RAP
IL36A
IL4I1
ING3
INPP5J
IQUB
ITGAE
ITPKB
JOSD1
KANK2
KAT14
KDM1A
KIF9
KIFC3
KLHL38
KLHL42
KPNA2
KRT1
KRT3
KRT4
KRT6A
KRT6B
KRT6C
KRT75
KRT76
KRT78
KRT79
KRT8
KRTAP11-1
KRTAP9-2
LENG1
LIN37
LINC00887
LMO1
LMO2
LMO3
LMO4
LNX1
LSM2
MAD2L2
MAOB
MAPK3
MBD3
MCM7
MEAF6
MFAP1
MGARP
MICAL2
MID2
MNS1
MRTFA
MSH5
MYLK2
MYO15B
MYO5B
NEK6
NGLY1
NTAQ1
NUP54
NUP58
OFCC1
OSGIN1
OSTF1
OTUB1
OTUB2
PABPC3
PAIP2
PARVG
PCDHGB1
PCDHGC3
PCSK7
PDZK1IP1
PICK1
PIK3R3
PIWIL1
PLEKHM1
PLK4
PPIG
PPP1R18
PRF1
PRKAB2
PRKG1
PRMT5
PRPF18
PRR35
PSMA1
PYGM
RAB35
RABGEF1
RAD23A
RAPSN
RASSF10
RBM15B
RBM41
RCOR3
RELT
RIMS3
RNF4
RSRC2
RUNX1T1
SCNM1
SDCBP
SEC14L4
SELE
SEMA4C
SENP3
SH2D1B
SHC3
SLC13A2
SLITRK3
SMARCD1
SMARCE1
SNF8
SOX14
SPG21
SPRING1
SSX2IP
STAM
STRC
STXBP4
STYXL1
SYCE3
SYTL5
TBC1D22B
TCAF1
TCAP
TCEA2
TCEANC
TCHP
TEAD4
TEPSIN
THAP4
THOC1
TJAP1
TLE6
TLR10
TMEM30A
TNFAIP1
TNR
TRIM55
TRIM63
TRIM69
TRIML2
TSG101
TSHZ3
TSPEAR
TSSK3
TTC23
TTC9C
UBE2D1
UBE2D2
UBE2D3
UBE2D4
UBE2E3
UBE2I
UBE2N
UBE2U
UBE2V2
UBL4A
UCHL1
UCHL3
UCHL5
USHBP1
USP15
USP18
USP2
USP21
USP33
USP35
USP4
USP5
USP7
USP8
UTP14C
VAMP4
VCAM1
VCP
VPS28
VPS9D1
XAF1
YEATS4
YOD1
ZBTB16
ZFHX3
ZGPAT
ZNF180
ZNF182
ZNF250
ZNF267
ZNF366
ZNF417
ZNF572
ZNF587
ZNF667-AS1
122 interacting genes:
ABI1
ABI2
ADAMTSL4
AKAP9
AKNA
ASB15
BANP
BCAS2
BCL11A
BHLHB9
BIVM
BLZF1
BNC2
BYSL
CARD9
CBY2
CCDC33
CCDC88B
CDCA7L
CDX4
CEP170P1
CEP44
CEP57L1
CHCHD3
DDIT4L
ERBIN
EVI5
FBXO16
GABPB1
GAS8
GATA3
GOLGA2
GPATCH2L
HDX
HGS
HMBOX1
HMG20A
HNRNPH1
HNRNPM
HOMEZ
HSPB2
HSPB2-C11orf52
IKZF1
IKZF3
ISY1
KANK2
KCTD1
KIAA1328
KRBOX4
KRT16
KRT40
KRT75
LDB1
LDB2
LPXN
LYL1
LZTS1
LZTS2
MAD1L1
MBD3L1
MEOX2
MISP
MSS51
NAGK
NDUFA7
NHLH1
NTAQ1
NUTM1
PHC2
PICK1
POLR3GL
PPP1R13B
PRDM6
PSMB1
PTPN3
PXN
RBBP8
RCN1
REL
SAXO1
SNTA1
SOX5
SPG21
SYTL4
TADA2A
TAL1
TAL2
TASOR2
TCF4
TCP10L
TFIP11
TLE5
TRIM27
TRIM35
TRIM54
TSC22D4
UFSP2
UHMK1
UNKL
UTP14A
VBP1
WASHC1
ZBTB43
ZBTB8B
ZCCHC12
ZFP90
ZNF143
ZNF177
ZNF19
ZNF219
ZNF24
ZNF354C
ZNF417
ZNF460
ZNF511
ZNF526
ZNF559-ZNF177
ZNF620
ZNF641
ZNF688
ZNF76
ZNF84
Entrez ID
57159
4004
HPRD ID
05928
01738
Ensembl ID
ENSG00000138100
ENSG00000166407
Uniprot IDs
Q9BYV2
E9PK83
P25800
PDB IDs
3Q1D
Enriched GO Terms of Interacting Partners
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Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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