SYNGR1 and PNKP

  • Number of citations of the paper that reports this interaction (PubMedID 32296183)
  • 86
  • Data Source:
  • BioGRID (two hybrid)

SYNGR1

PNKP

Description synaptogyrin 1 polynucleotide kinase 3'-phosphatase
Image No pdb structure
GO Annotations Cellular Component
Molecular Function
Biological Process
Pathways
Drugs
Diseases
GWAS
  • Blond vs. brown/black hair color ( 30531825)
  • Cholesteryl ester levels ( 31551469)
  • Crohn's disease ( 28067908)
  • Factor VIII levels ( 30586737)
  • IgG bisecting N-acetyl glucosamine phenotypes (multivariate analysis) ( 28878392)
  • IgG digalactosylation phenotypes (multivariate analysis) ( 28878392)
  • IgG disialylation phenotypes (multivariate analysis) ( 28878392)
  • IgG fucosylation phenotypes (multivariate analysis) ( 28878392)
  • IgG galactosylation phenotypes (multivariate analysis) ( 28878392)
  • IgG glycosylation ( 23382691)
  • IgG monogalactosylation phenotypes (multivariate analysis) ( 28878392)
  • IgG N-glycosylation phenotypes (multivariate analysis) ( 28878392)
  • IgG sialylation phenotypes (multivariate analysis) ( 28878392)
  • Inflammatory bowel disease ( 28067908)
  • Ovarian cancer ( 30557369)
  • Primary biliary cholangitis ( 28425483 26394269)
  • Primary biliary cirrhosis ( 22961000)
  • Response to methotrexate in juvenile idiopathic arthritis ( 24709693)
  • Rheumatoid arthritis ( 32723749 30423114 24390342)
  • Rheumatoid arthritis (ACPA-positive) ( 24532676)
  • Sleep duration (short sleep) ( 30846698)
  • Systemic lupus erythematosus ( 33272962)
  • Ulcerative colitis ( 28067908)
  • vWF levels ( 30586737)
Interacting Genes 31 interacting genes: ADORA2A AQP6 CACNA1I CREB3 CREB3L1 EBP ERGIC3 FAM209A FATE1 GPR42 HAS3 LEPROT LMNA MTERF3 MYG1 NDRG4 PLEKHB2 PLIN3 PNKP RETREG3 SDCBP SLC10A6 SLC16A2 SNX1 SPG21 SPNS3 TMEM14B TMEM31 TMEM45B TMEM80 UNC93A 50 interacting genes: APP CACFD1 CAMK2B CARD10 CCDC14 CCDC43 CISD2 CNTROB COL17A1 DVL3 FADS6 GAS8 GZMK IKZF1 KANK2 KDM1A KLHL12 KRTAP4-12 LMNA MAGEA11 MCC MEOX2 MGST2 MSANTD4 MYOZ1 OBI1 OGT PICK1 PNMA5 POLB PSTPIP1 RPRM SFT2D1 SMAD5 SNX2 SP4 SUV39H1 SYNGR1 SYNGR3 SYP TARBP2 TBC1D1 THAP1 TMEM239 TNIP1 TRIM37 XRCC1 XRCC4 ZBTB14 ZNF639
Entrez ID 9145 11284
HPRD ID 06800 09284
Ensembl ID ENSG00000100321 ENSG00000039650
Uniprot IDs O43759 Q96T60
PDB IDs 2BRF 2W3O
Enriched GO Terms of Interacting Partners?
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Tagcloud (Difference) ?
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