BRCA1 and POLB

Number of citations of the paper that reports this interaction (PubMedID 23826138)
6

Data Source:
BioGRID (pull down, pull down, imaging technique)

		BRCA1	POLB
Description		BRCA1 DNA repair associated	DNA polymerase beta
Image
GO Annotations	Cellular Component	Ubiquitin Ligase Complex Lateral Element Gamma-tubulin Large Complex Nucleus Nucleoplasm Chromosome Cytoplasm Plasma Membrane Nuclear Body BRCA1-BARD1 Complex Protein-containing Complex BRCA1-A Complex Ribonucleoprotein Complex	Nucleus Nucleoplasm Cytoplasm Microtubule Spindle Microtubule Protein-containing Complex
	Molecular Function	Transcription Cis-regulatory Region Binding DNA Binding Damaged DNA Binding Transcription Coactivator Activity RNA Binding Ubiquitin-protein Transferase Activity Protein Binding Zinc Ion Binding Tubulin Binding Enzyme Binding Ubiquitin Protein Ligase Binding RNA Polymerase Binding	Damaged DNA Binding DNA-directed DNA Polymerase Activity DNA-(apurinic Or Apyrimidinic Site) Endonuclease Activity Protein Binding Microtubule Binding Lyase Activity Enzyme Binding Metal Ion Binding
	Biological Process	Double-strand Break Repair Via Homologous Recombination Postreplication Repair Double-strand Break Repair Regulation Of Gene Expression By Genetic Imprinting Regulation Of Transcription By RNA Polymerase II Fatty Acid Biosynthetic Process Cellular Response To DNA Damage Stimulus Chromosome Segregation Mitotic G2 DNA Damage Checkpoint Signaling Centrosome Cycle Intrinsic Apoptotic Signaling Pathway In Response To DNA Damage Dosage Compensation By Inactivation Of X Chromosome Response To Ionizing Radiation Positive Regulation Of Vascular Endothelial Growth Factor Production Positive Regulation Of Gene Expression Protein Ubiquitination Positive Regulation Of Protein Ubiquitination Negative Regulation Of Intracellular Estrogen Receptor Signaling Pathway Positive Regulation Of Histone Acetylation Negative Regulation Of Histone Acetylation Chordate Embryonic Development Response To Estrogen Regulation Of DNA Methylation Negative Regulation Of Fatty Acid Biosynthetic Process Positive Regulation Of DNA Repair Positive Regulation Of Angiogenesis Negative Regulation Of Transcription, DNA-templated Positive Regulation Of Transcription, DNA-templated Positive Regulation Of Transcription By RNA Polymerase II Negative Regulation Of Centriole Replication Positive Regulation Of Histone H3-K4 Methylation Negative Regulation Of Histone H3-K4 Methylation Negative Regulation Of Histone H3-K9 Methylation Positive Regulation Of Histone H3-K9 Methylation Regulation Of Cell Cycle Protein Autoubiquitination Positive Regulation Of Histone H4-K20 Methylation Cellular Response To Tumor Necrosis Factor Cellular Response To Indole-3-methanol Protein K6-linked Ubiquitination Negative Regulation Of Extrinsic Apoptotic Signaling Pathway Via Death Domain Receptors Negative Regulation Of Reactive Oxygen Species Metabolic Process Positive Regulation Of Histone H3-K9 Acetylation Positive Regulation Of Histone H4-K16 Acetylation	In Utero Embryonic Development DNA-dependent DNA Replication DNA Repair Base-excision Repair Base-excision Repair, Base-free Sugar-phosphate Removal Base-excision Repair, Gap-filling Pyrimidine Dimer Repair Nucleotide-excision Repair, DNA Gap Filling Double-strand Break Repair Via Nonhomologous End Joining Inflammatory Response Cellular Response To DNA Damage Stimulus Salivary Gland Morphogenesis Aging Intrinsic Apoptotic Signaling Pathway In Response To DNA Damage Response To Gamma Radiation Somatic Hypermutation Of Immunoglobulin Genes Response To Ethanol Lymph Node Development Spleen Development Homeostasis Of Number Of Cells Neuron Apoptotic Process Response To Hyperoxia Immunoglobulin Heavy Chain V-D-J Recombination DNA Biosynthetic Process
Pathways		Meiotic synapsis SUMOylation of DNA damage response and repair proteins HDR through Single Strand Annealing (SSA) HDR through Homologous Recombination (HRR) Metalloprotease DUBs Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA) Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks Resolution of D-loop Structures through Holliday Junction Intermediates Nonhomologous End-Joining (NHEJ) Homologous DNA Pairing and Strand Exchange Processing of DNA double-strand break ends Presynaptic phase of homologous DNA pairing and strand exchange TP53 Regulates Transcription of DNA Repair Genes Regulation of TP53 Activity through Phosphorylation G2/M DNA damage checkpoint Transcriptional Regulation by E2F6 Meiotic recombination Defective DNA double strand break response due to BRCA1 loss of function Defective DNA double strand break response due to BARD1 loss of function Defective HDR through Homologous Recombination Repair (HRR) due to PALB2 loss of BRCA1 binding function Defective HDR through Homologous Recombination Repair (HRR) due to PALB2 loss of BRCA2/RAD51/RAD51C binding function	POLB-Dependent Long Patch Base Excision Repair Resolution of AP sites via the multiple-nucleotide patch replacement pathway Resolution of AP sites via the single-nucleotide replacement pathway APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway PCNA-Dependent Long Patch Base Excision Repair Ub-specific processing proteases Abasic sugar-phosphate removal via the single-nucleotide replacement pathway
Drugs			Cytarabine Iron dATP (1S)-1,2,3,4-TETRAHYDRO-BENZO[C]PHENANTHRENE-2,3,4-TRIOL Ferrous gluconate Ferrous succinate Ferrous ascorbate Ferrous fumarate Ferrous glycine sulfate
Diseases
GWAS		Aspartate aminotransferase levels ( 33547301) Gynecologic disease (multivariate analysis) ( 31488892) Menopause (age at onset) ( 26414677 29773799) Monocyte percentage of white cells ( 32888494) Ovarian cancer ( 31488892) Ovarian cancer (MTAG) ( 31488892)	Plasma parathyroid hormone levels ( 30134803) Plasma plasminogen activator levels ( 24578379)
Interacting Genes		318 interacting genes: ABL1 ABLIM3 ABRAXAS1 ACACA ACTG1 ACTN3 AHR AKT1 ALDH1A1 ANKRD28 ANTXR1 AP1M1 APLP2 AR ARNT ASH2L ATF1 ATM ATP1B1 ATP1B3 ATR ATRIP AURKA AURKC BABAM1 BAP1 BARD1 BRAP BRAT1 BRCA2 BRCC3 BRIP1 BRSK1 C2CD6 CABYR CASP3 CBX1 CBX5 CCDC120 CCNA1 CCNA2 CCNB1 CCND1 CDC25C CDK1 CDK2 CDK4 CDK7 CDKN2D CEP57L1 CHEK1 CHEK2 CLSPN CNRIP1 CNTLN CNTN4 COL1A1 COMMD1 CREBBP CRY2 CRYZL1 CSNK1D CSNK2A1 CSNK2B CSTF1 CTBP1 CTCFL CTNNB1 CUBN CWF19L2 DALRD3 DBF4 DCLRE1C DCN DDX24 DES DHPS DHX9 DNAJA1 DNAJA3 DNAJB1 DNHD1 DYNC1H1 DYNLT2B E2F1 E2F4 EED EIF3B EIF4A2 EIF5B ELK1 ELK4 ELOA ENO1 EP300 ERCC5 ERO1B ESR1 ETS1 ETV5 EZH2 FAM161A FAM184A FANCA FANCD2 FBXO44 FHL2 FLI1 FLNA FXR2 GCC1 GFI1B GGN GOLGA8DP GTF3C4 GUSBP1 H2AC20 H2AC4 H2AX HDAC1 HDAC2 HECTD3 HGF HIBADH HIVEP1 HNRNPC HNRNPD HORMAD1 HSPA14 HSPA8 HSPD1 IFI16 INPP1 ITIH5 ITPR1 ITPRID2 JAK1 JAK2 JUN JUNB JUND JUP KAT5 KDM1A KIF1B KPNA2 KPNA6 LARP7 LCK LCMT1 LDHC LMNTD1 LMO4 LONRF1 MACROH2A1 MAN2C1 MAP3K1 MAP3K14 MAP3K3 MAP4K4 MARCKSL1 MDC1 MED1 MED21 MID2 MLH1 MNAT1 MSH2 MSH3 MSH6 MT-ND1 MYC MYOZ1 NBN NCOA2 NCOA3 NELFB NFKB1 NFYA NKAPL NMI NPC2 NRIP1 NSD2 NUFIP1 NUP153 OBSCN PARG PEG3 PEX5 PGR PHF12 PIAS1 PIAS4 PIK3R1 PILRB PIN1 PISD POLB POLR2A POLR2H POLR2K POM121 POMGNT1 POU2F1 PPP1CA PPP1CB PPP1R13B PPP2R5C PREP PRKAG3 PRKDC PRMT1 PRPF3 PSAP PSMA6 PSMA7 PSMD9 PSMG1 RACK1 RAD51 RANBP9 RB1 RBBP4 RBBP7 RBBP8 RBL1 RBL2 RCC1L RELA RFC1 RNF216 RPGRIP1 RPL31 RTKN2 RTL10 RUNX1T1 RWDD2B RWDD4 SDK2 SETX SKP2 SMAD2 SMAD3 SMAD4 SMARCA2 SMARCA4 SMC1A SNRNP200 SNX3 SNX6 SOX30 SP1 SPATA4 SQSTM1 SSX2IP STAC2 STAT1 STAT3 STAT5A SUMO1 SYT6 TARS1 TATDN2 TCEA2 TCEANC TEX101 THOC3 TLE4 TMPRSS12 TNS2 TOP1 TOP2A TP53 TP53BP1 TPTE2 TRIM24 TRIM46 TRIM74 TRRAP TSEN54 TSGA10IP TUBA4A TUBB TUBG1 TULP2 TXLNA UBB UBC UBE2D1 UBE2D2 UBE2D3 UBE2E1 UBE2E2 UBE2E3 UBE2J1 UBE2K UBE2L3 UBE2N UBE2T UBE2W UBE3A UBXN1 USF2 USH2A USP2 VCP WDR6 WNT2B WRN XIAP XRCC1 XRCC5 YY1 ZNF280D ZNF350 ZNF423 ZSCAN21	19 interacting genes: APEX1 BRCA1 EP300 HUS1 HUWE1 KAT7 NEIL1 PCNA PNKP PRKCA RAD1 RAD9A SRPK2 STUB1 TAF1D TLE1 TPP2 WRN XRCC1
Entrez ID		672	5423
HPRD ID		00218	07517
Ensembl ID		ENSG00000012048	ENSG00000070501
Uniprot IDs		A0A024R1V0 P38398	B7Z1W5 P06746
PDB IDs		1JM7 1JNX 1N5O 1OQA 1T15 1T29 1T2U 1T2V 1Y98 2ING 3COJ 3K0H 3K0K 3K15 3K16 3PXA 3PXB 3PXC 3PXD 3PXE 4IFI 4IGK 4JLU 4OFB 4U4A 4Y18 4Y2G 6G2I	1BPX 1BPY 1BPZ 1MQ2 1MQ3 1TV9 1TVA 1ZJM 1ZJN 1ZQA 1ZQB 1ZQC 1ZQD 1ZQE 1ZQF 1ZQG 1ZQH 1ZQI 1ZQJ 1ZQK 1ZQL 1ZQM 1ZQN 1ZQO 1ZQP 1ZQQ 1ZQR 1ZQS 1ZQT 2FMP 2FMQ 2FMS 2I9G 2ISO 2ISP 2P66 2PXI 3C2K 3C2L 3C2M 3GDX 3ISB 3ISC 3ISD 3JPN 3JPO 3JPP 3JPQ 3JPR 3JPS 3JPT 3LK9 3MBY 3OGU 3RH4 3RH5 3RH6 3RJE 3RJF 3RJG 3RJH 3RJI 3RJJ 3RJK 3TFR 3TFS 4DO9 4DOA 4DOB 4DOC 4F5N 4F5O 4F5P 4F5Q 4F5R 4GXI 4GXJ 4GXK 4JWM 4JWN 4KLD 4KLE 4KLF 4KLG 4KLH 4KLI 4KLJ 4KLL 4KLM 4KLO 4KLQ 4KLS 4KLT 4KLU 4LVS 4M2Y 4M47 4M9G 4M9H 4M9J 4M9L 4M9N 4MF2 4MF8 4MFA 4MFC 4MFF 4NLK 4NLN 4NLZ 4NM1 4NM2 4NXZ 4NY8 4O5C 4O5E 4O5K 4O9M 4P2H 4PGQ 4PGX 4PGY 4PH5 4PHA 4PHD 4PHE 4PHP 4PPX 4R63 4R64 4R65 4R66 4RPX 4RPY 4RPZ 4RQ0 4RQ1 4RQ2 4RQ3 4RQ4 4RQ5 4RQ6 4RQ7 4RQ8 4RT2 4RT3 4TUP 4TUQ 4TUR 4TUS 4UAW 4UAY 4UAZ 4UB1 4UB2 4UB3 4UB4 4UB5 4UBB 4UBC 4YMM 4YMN 4YMO 4YN4 4Z6C 4Z6D 4Z6E 4Z6F 5BOL 5BOM 5BPC 5DB6 5DB7 5DB8 5DB9 5DBA 5DBB 5DBC 5EOZ 5HHH 5HHI 5J0O 5J0P 5J0Q 5J0R 5J0S 5J0T 5J0U 5J0W 5J0X 5J0Y 5J29 5J2A 5J2B 5J2C 5J2D 5J2E 5J2F 5J2G 5J2H 5J2I 5J2J 5J2K 5TB8 5TB9 5TBA 5TBB 5TBC 5TZV 5U2R 5U2S 5U2T 5U8G 5U8H 5U8I 5U9H 5UGN 5UGO 5UGP 5V1F 5V1G 5V1H 5V1I 5V1J 5V1N 5V1O 5V1P 5V1R 5VEZ 5VRW 5VRX 5VRY 5VRZ 5VS0 5VS1 5VS2 5VS3 5VS4 5WNX 5WNY 5WNZ 5WO0 6BEL 6BEM 6BTE 6BTF 6CLY 6CPQ 6CR3 6CR4 6CR5 6CR6 6CR7 6CR8 6CR9 6CRB 6CRC 6CRH 6CTI 6CTJ 6CTK 6CTL 6CTM 6CTN 6CTO 6CTP 6CTQ 6CTR 6CTT 6CTU 6CTV 6CTW 6CTX 6CU9 6CUA 6CUB 6DIA 6DIC 6E3R 6E3V 6E3W 6E3X 6G2Q 6MR7 6MR8 6N2R 6N2S 6N2T 6NKR 6NKS 6NKT 6NKU 6NKV 6NKW 6NKX 6NKY 6NKZ 6NL0 6PH5 6PH6 6PKZ 6U2O 6U6B 6UOK 6UOL 6UOM 6W2M 7ICE 7ICF 7ICG 7ICH 7ICI 7ICJ 7ICK 7ICL 7ICM 7ICN 7ICO 7ICP 7ICQ 7ICR 7ICS 7ICT 7ICU 7ICV 7K96 7K97 8ICA 8ICB 8ICC 8ICE 8ICF 8ICG 8ICH 8ICI 8ICJ 8ICK 8ICL 8ICM 8ICN 8ICO 8ICP 8ICQ 8ICR 8ICS 8ICT 8ICU 8ICV 8ICW 8ICX 8ICY 8ICZ 9ICA 9ICB 9ICC 9ICE 9ICF 9ICG 9ICH 9ICI 9ICJ 9ICK 9ICL 9ICM 9ICN 9ICO 9ICP 9ICQ 9ICR 9ICS 9ICT 9ICU 9ICV 9ICW 9ICX 9ICY
Enriched GO Terms of Interacting Partners?
Tagcloud ?
Tagcloud (Difference) ?
Tagcloud (Intersection) ?