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BRCA1 and KDM1A
Number of citations of the paper that reports this interaction (PubMedID
22990118
)
49
Data Source:
BioGRID
(affinity chromatography technology, two hybrid, affinity chromatography technology)
BRCA1
KDM1A
Description
BRCA1 DNA repair associated
lysine demethylase 1A
Image
GO Annotations
Cellular Component
Ubiquitin Ligase Complex
Lateral Element
Gamma-tubulin Large Complex
Nucleus
Nucleoplasm
Chromosome
Cytoplasm
Plasma Membrane
Nuclear Body
BRCA1-BARD1 Complex
Protein-containing Complex
BRCA1-A Complex
Ribonucleoprotein Complex
Chromosome, Telomeric Region
Chromatin
Nucleus
Nucleoplasm
Transcription Regulator Complex
Protein-containing Complex
DNA Repair Complex
Molecular Function
Transcription Cis-regulatory Region Binding
DNA Binding
Damaged DNA Binding
Transcription Coactivator Activity
RNA Binding
Ubiquitin-protein Transferase Activity
Protein Binding
Zinc Ion Binding
Tubulin Binding
Enzyme Binding
Ubiquitin Protein Ligase Binding
RNA Polymerase Binding
P53 Binding
Chromatin Binding
Protein Binding
Transcription Factor Binding
Oxidoreductase Activity
Enzyme Binding
Nuclear Receptor Coactivator Activity
Demethylase Activity
Histone Demethylase Activity
Histone H3-methyl-lysine-4 Demethylase Activity
Histone H3-methyl-lysine-9 Demethylase Activity
Telomeric DNA Binding
MRF Binding
Flavin Adenine Dinucleotide Binding
Androgen Receptor Binding
RNA Polymerase II-specific DNA-binding Transcription Factor Binding
Telomeric Repeat-containing RNA Binding
Promoter-specific Chromatin Binding
Biological Process
Double-strand Break Repair Via Homologous Recombination
Postreplication Repair
Double-strand Break Repair
Regulation Of Gene Expression By Genetic Imprinting
Regulation Of Transcription By RNA Polymerase II
Fatty Acid Biosynthetic Process
Cellular Response To DNA Damage Stimulus
Chromosome Segregation
Mitotic G2 DNA Damage Checkpoint Signaling
Centrosome Cycle
Intrinsic Apoptotic Signaling Pathway In Response To DNA Damage
Dosage Compensation By Inactivation Of X Chromosome
Response To Ionizing Radiation
Positive Regulation Of Vascular Endothelial Growth Factor Production
Positive Regulation Of Gene Expression
Protein Ubiquitination
Positive Regulation Of Protein Ubiquitination
Negative Regulation Of Intracellular Estrogen Receptor Signaling Pathway
Positive Regulation Of Histone Acetylation
Negative Regulation Of Histone Acetylation
Chordate Embryonic Development
Response To Estrogen
Regulation Of DNA Methylation
Negative Regulation Of Fatty Acid Biosynthetic Process
Positive Regulation Of DNA Repair
Positive Regulation Of Angiogenesis
Negative Regulation Of Transcription, DNA-templated
Positive Regulation Of Transcription, DNA-templated
Positive Regulation Of Transcription By RNA Polymerase II
Negative Regulation Of Centriole Replication
Positive Regulation Of Histone H3-K4 Methylation
Negative Regulation Of Histone H3-K4 Methylation
Negative Regulation Of Histone H3-K9 Methylation
Positive Regulation Of Histone H3-K9 Methylation
Regulation Of Cell Cycle
Protein Autoubiquitination
Positive Regulation Of Histone H4-K20 Methylation
Cellular Response To Tumor Necrosis Factor
Cellular Response To Indole-3-methanol
Protein K6-linked Ubiquitination
Negative Regulation Of Extrinsic Apoptotic Signaling Pathway Via Death Domain Receptors
Negative Regulation Of Reactive Oxygen Species Metabolic Process
Positive Regulation Of Histone H3-K9 Acetylation
Positive Regulation Of Histone H4-K16 Acetylation
Negative Regulation Of Transcription By RNA Polymerase II
Alternative MRNA Splicing, Via Spliceosome
Positive Regulation Of Neuroblast Proliferation
Regulation Of Transcription By RNA Polymerase II
Protein Demethylation
Regulation Of Double-strand Break Repair Via Homologous Recombination
Positive Regulation Of Neuron Projection Development
Cerebral Cortex Development
Negative Regulation Of Protein Binding
Histone H3-K9 Demethylation
Positive Regulation Of Histone Ubiquitination
Cellular Response To UV
Histone H3-K4 Demethylation
Positive Regulation Of Chromatin Binding
Neuron Maturation
Negative Regulation Of DNA Binding
Negative Regulation Of DNA-binding Transcription Factor Activity
Negative Regulation Of DNA Damage Response, Signal Transduction By P53 Class Mediator
Positive Regulation Of Cell Size
Negative Regulation Of Transcription, DNA-templated
Positive Regulation Of Transcription By RNA Polymerase II
Guanine Metabolic Process
Positive Regulation Of DNA-binding Transcription Factor Activity
Negative Regulation Of Histone H3-K4 Methylation
Negative Regulation Of Histone H3-K9 Methylation
Muscle Cell Development
Regulation Of Androgen Receptor Signaling Pathway
Response To Fungicide
Cellular Response To CAMP
Cellular Response To Gamma Radiation
Positive Regulation Of Cold-induced Thermogenesis
Negative Regulation Of Intrinsic Apoptotic Signaling Pathway In Response To DNA Damage By P53 Class Mediator
Regulation Of Cellular Protein Localization
Positive Regulation Of Neural Precursor Cell Proliferation
Positive Regulation Of Stem Cell Proliferation
Pathways
Meiotic synapsis
SUMOylation of DNA damage response and repair proteins
HDR through Single Strand Annealing (SSA)
HDR through Homologous Recombination (HRR)
Metalloprotease DUBs
Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
Resolution of D-loop Structures through Holliday Junction Intermediates
Nonhomologous End-Joining (NHEJ)
Homologous DNA Pairing and Strand Exchange
Processing of DNA double-strand break ends
Presynaptic phase of homologous DNA pairing and strand exchange
TP53 Regulates Transcription of DNA Repair Genes
Regulation of TP53 Activity through Phosphorylation
G2/M DNA damage checkpoint
Transcriptional Regulation by E2F6
Meiotic recombination
Defective DNA double strand break response due to BRCA1 loss of function
Defective DNA double strand break response due to BARD1 loss of function
Defective HDR through Homologous Recombination Repair (HRR) due to PALB2 loss of BRCA1 binding function
Defective HDR through Homologous Recombination Repair (HRR) due to PALB2 loss of BRCA2/RAD51/RAD51C binding function
HDACs deacetylate histones
HDMs demethylate histones
Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3
Regulation of PTEN gene transcription
Estrogen-dependent gene expression
NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux
Potential therapeutics for SARS
Factors involved in megakaryocyte development and platelet production
Drugs
Diseases
GWAS
Aspartate aminotransferase levels (
33547301
)
Gynecologic disease (multivariate analysis) (
31488892
)
Menopause (age at onset) (
26414677
29773799
)
Monocyte percentage of white cells (
32888494
)
Ovarian cancer (
31488892
)
Ovarian cancer (MTAG) (
31488892
)
Brain morphology (min-P) (
32665545
)
Brain morphology (MOSTest) (
32665545
)
Cortical surface area (min-P) (
32665545
)
Cortical surface area (MOSTest) (
32665545
)
Cortical thickness (min-P) (
32665545
)
Cortical thickness (MOSTest) (
32665545
)
Gamma glutamyl transferase levels (
29403010
33339817
)
Global electrical heterogeneity phenotypes (
29622589
)
Pulse pressure (
27841878
)
Subcortical volume (min-P) (
32665545
)
Subcortical volume (MOSTest) (
32665545
)
Interacting Genes
318 interacting genes:
ABL1
ABLIM3
ABRAXAS1
ACACA
ACTG1
ACTN3
AHR
AKT1
ALDH1A1
ANKRD28
ANTXR1
AP1M1
APLP2
AR
ARNT
ASH2L
ATF1
ATM
ATP1B1
ATP1B3
ATR
ATRIP
AURKA
AURKC
BABAM1
BAP1
BARD1
BRAP
BRAT1
BRCA2
BRCC3
BRIP1
BRSK1
C2CD6
CABYR
CASP3
CBX1
CBX5
CCDC120
CCNA1
CCNA2
CCNB1
CCND1
CDC25C
CDK1
CDK2
CDK4
CDK7
CDKN2D
CEP57L1
CHEK1
CHEK2
CLSPN
CNRIP1
CNTLN
CNTN4
COL1A1
COMMD1
CREBBP
CRY2
CRYZL1
CSNK1D
CSNK2A1
CSNK2B
CSTF1
CTBP1
CTCFL
CTNNB1
CUBN
CWF19L2
DALRD3
DBF4
DCLRE1C
DCN
DDX24
DES
DHPS
DHX9
DNAJA1
DNAJA3
DNAJB1
DNHD1
DYNC1H1
DYNLT2B
E2F1
E2F4
EED
EIF3B
EIF4A2
EIF5B
ELK1
ELK4
ELOA
ENO1
EP300
ERCC5
ERO1B
ESR1
ETS1
ETV5
EZH2
FAM161A
FAM184A
FANCA
FANCD2
FBXO44
FHL2
FLI1
FLNA
FXR2
GCC1
GFI1B
GGN
GOLGA8DP
GTF3C4
GUSBP1
H2AC20
H2AC4
H2AX
HDAC1
HDAC2
HECTD3
HGF
HIBADH
HIVEP1
HNRNPC
HNRNPD
HORMAD1
HSPA14
HSPA8
HSPD1
IFI16
INPP1
ITIH5
ITPR1
ITPRID2
JAK1
JAK2
JUN
JUNB
JUND
JUP
KAT5
KDM1A
KIF1B
KPNA2
KPNA6
LARP7
LCK
LCMT1
LDHC
LMNTD1
LMO4
LONRF1
MACROH2A1
MAN2C1
MAP3K1
MAP3K14
MAP3K3
MAP4K4
MARCKSL1
MDC1
MED1
MED21
MID2
MLH1
MNAT1
MSH2
MSH3
MSH6
MT-ND1
MYC
MYOZ1
NBN
NCOA2
NCOA3
NELFB
NFKB1
NFYA
NKAPL
NMI
NPC2
NRIP1
NSD2
NUFIP1
NUP153
OBSCN
PARG
PEG3
PEX5
PGR
PHF12
PIAS1
PIAS4
PIK3R1
PILRB
PIN1
PISD
POLB
POLR2A
POLR2H
POLR2K
POM121
POMGNT1
POU2F1
PPP1CA
PPP1CB
PPP1R13B
PPP2R5C
PREP
PRKAG3
PRKDC
PRMT1
PRPF3
PSAP
PSMA6
PSMA7
PSMD9
PSMG1
RACK1
RAD51
RANBP9
RB1
RBBP4
RBBP7
RBBP8
RBL1
RBL2
RCC1L
RELA
RFC1
RNF216
RPGRIP1
RPL31
RTKN2
RTL10
RUNX1T1
RWDD2B
RWDD4
SDK2
SETX
SKP2
SMAD2
SMAD3
SMAD4
SMARCA2
SMARCA4
SMC1A
SNRNP200
SNX3
SNX6
SOX30
SP1
SPATA4
SQSTM1
SSX2IP
STAC2
STAT1
STAT3
STAT5A
SUMO1
SYT6
TARS1
TATDN2
TCEA2
TCEANC
TEX101
THOC3
TLE4
TMPRSS12
TNS2
TOP1
TOP2A
TP53
TP53BP1
TPTE2
TRIM24
TRIM46
TRIM74
TRRAP
TSEN54
TSGA10IP
TUBA4A
TUBB
TUBG1
TULP2
TXLNA
UBB
UBC
UBE2D1
UBE2D2
UBE2D3
UBE2E1
UBE2E2
UBE2E3
UBE2J1
UBE2K
UBE2L3
UBE2N
UBE2T
UBE2W
UBE3A
UBXN1
USF2
USH2A
USP2
VCP
WDR6
WNT2B
WRN
XIAP
XRCC1
XRCC5
YY1
ZNF280D
ZNF350
ZNF423
ZSCAN21
265 interacting genes:
AKAP9
ANKEF1
ANKRD23
AP1G2
AR
ARHGAP15
ARHGAP29
ASB10
ASB3
ASCC2
ATP5MF
ATP6V1B1
BAHD1
BAIAP2
BATF
BCAT1
BIRC2
BLZF1
BMP3
BRCA1
C18orf54
C4orf17
C8orf48
C8orf74
CAGE1
CARD10
CARM1
CCDC121
CCDC14
CCDC172
CCDC33
CCDC74A
CCDC74B
CCDC90B
CDC23
CDC5L
CDCA4
CDCA5
CENPQ
CEP162
CEP57
CEP70
CEP76
CFAP100
COIL
CRBN
CRLF3
CSNK2A1
CSNK2A2
CTBP1
DBF4B
DNAAF4
DNAJA3
DNTTIP1
E2F1
ECI2
ELOF1
EXOC1
EXOC7
FAM161A
FAM204A
FAM9A
FIGNL1
FYCO1
FYN
GABPB2
GAS8
GATA3
GCC1
GDF9
GLYR1
GOLGA2
GOLGA6A
GPATCH2L
GSK3B
GSTCD
GTPBP2
H3-4
H3-5
H3C1
H3C14
HAUS1
HAUS3
HAUS6
HDAC1
HESX1
HOMER3
HOXA1
ID2
IFI35
IGFBP4
IK
IKBIP
IL16
IMMT
INSM1
INTS2
ISL1
ITGB3BP
ITSN2
JRK
KANSL1
KASH5
KDM5B
KIAA0408
KIFC3
KLC3
KLF3
KLHDC4
KRT15
KRT17
KRT19
KRT222
KRT31
KRT33B
KRT35
KRT38
KRT39
KRT40
KRT6A
KRT6B
KRT7
L3MBTL3
LENG8
LINC00511
LINC02875
LOXL4
LZTS1
MALT1
MBD3
MBD4
MCPH1
MCRS1
METTL27
MLC1
MNS1
MTA3
MTF2
MTMR9
MTO1
MYC
MYLIP
NBPF15
NBPF26
NDUFA8
NDUFS1
NECAB2
NEFL
NFE2L2
NMI
NOSTRIN
NR1H2
NR1H3
NR2C2
NR2E1
NRBF2
ODAD3
OFCC1
OIP5
OPA3
OTUB1
PBX4
PDCD5
PDE4DIP
PEX7
PFDN5
PHC2
PHF19
PHF20L1
PHF21A
PMF1
PNKP
PPARD
PPM1D
PPP1R12A
PRDM1
PRIM2
PSMC1
PSMC3
PTEN
RASSF1
RASSF2
RASSF3
RASSF8
RCOR1
RCOR3
RIOK1
RNF10
RNF168
RPRD1A
SAMD3
SEPTIN6
SERGEF
SETDB1
SF3B2
SH3GLB2
SLU7
SMAD9
SMARCD1
SMN1
SNF8
SNX15
SOCS6
SPATA22
SPATA24
SPICE1
SPRY2
SPSB1
SPZ1
SRGAP3
SSX2IP
STAT3
STX11
STX19
SUMO2
SUV39H1
TACC1
TADA3
TAL1
TDO2
TEDC2
TERF1
TEX35
TEX9
TFIP11
TLE5
TMEM266
TNFAIP1
TNNT2
TP53
TP53BP1
TP53BP2
TRAF4
TRIM39
TRIM54
TSACC
TSC1
TTC23
TTC33
UBA3
UBASH3B
UBE2I
UCHL5
UNC119
UNKL
USP28
VPS11
VPS37A
VPS37B
WASHC3
WDR83
ZBED1
ZBTB24
ZBTB39
ZCCHC17
ZFP28
ZNF280A
ZNF333
ZNF436
ZNF451
ZNF480
ZNF581
ZNF641
ZNF71
ZNF829
Entrez ID
672
23028
HPRD ID
00218
09800
Ensembl ID
ENSG00000012048
ENSG00000004487
Uniprot IDs
A0A024R1V0
P38398
O60341
PDB IDs
1JM7
1JNX
1N5O
1OQA
1T15
1T29
1T2U
1T2V
1Y98
2ING
3COJ
3K0H
3K0K
3K15
3K16
3PXA
3PXB
3PXC
3PXD
3PXE
4IFI
4IGK
4JLU
4OFB
4U4A
4Y18
4Y2G
6G2I
2COM
2DW4
2EJR
2H94
2HKO
2IW5
2L3D
2UXN
2UXX
2V1D
2X0L
2XAF
2XAG
2XAH
2XAJ
2XAQ
2XAS
2Y48
2Z3Y
2Z5U
3ABT
3ABU
3ZMS
3ZMT
3ZMU
3ZMV
3ZMZ
3ZN0
3ZN1
4BAY
4CZZ
4KUM
4UV8
4UV9
4UVA
4UVB
4UVC
4UXN
4XBF
5AFW
5H6Q
5H6R
5IT3
5L3B
5L3C
5L3D
5L3E
5L3F
5L3G
5LBQ
5LGN
5LGT
5LGU
5LHG
5LHH
5LHI
5X60
5YJB
6E1F
6K3E
6KGK
6KGL
6KGM
6KGN
6KGO
6KGP
6KGQ
6KGR
6NQM
6NQU
6NR5
6S35
6TE1
6VYP
6W4K
7JJL
7JJM
7JK7
Enriched GO Terms of Interacting Partners
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