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CTCF and DHX38
CTCF
DHX38
Description
CCCTC-binding factor
DEAH-box helicase 38
Image
GO Annotations
Cellular Component
Chromosome, Centromeric Region
Condensed Chromosome
Nucleus
Nucleoplasm
Nucleolus
Intracellular Anatomical Structure
Nucleus
Nucleoplasm
Spliceosomal Complex
Membrane
Catalytic Step 2 Spliceosome
Molecular Function
Transcription Cis-regulatory Region Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
Transcription Coregulator Binding
DNA-binding Transcription Repressor Activity, RNA Polymerase II-specific
DNA-binding Transcription Factor Activity
Protein Binding
Zinc Ion Binding
Chromatin Insulator Sequence Binding
Sequence-specific DNA Binding
RNA Binding
RNA Helicase Activity
Protein Binding
ATP Binding
ATP Hydrolysis Activity
Biological Process
Negative Regulation Of Transcription By RNA Polymerase II
DNA Methylation
Regulation Of Gene Expression By Genetic Imprinting
Regulation Of Transcription By RNA Polymerase II
Chromosome Segregation
Negative Regulation Of Cell Population Proliferation
Maintenance Of DNA Methylation
Positive Regulation Of Gene Expression
Negative Regulation Of Gene Expression
Nucleosome Positioning
Regulation Of Histone Methylation
Regulation Of Histone Acetylation
Regulation Of Gene Expression, Epigenetic
Regulation Of Molecular Function, Epigenetic
Negative Regulation Of Transcription, DNA-templated
Positive Regulation Of Transcription, DNA-templated
Regulation Of Centromeric Sister Chromatid Cohesion
Protein Localization To Chromosome, Centromeric Region
Genetic Imprinting
MRNA Splicing, Via Spliceosome
Pathways
Activation of anterior HOX genes in hindbrain development during early embryogenesis
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3'-end processing
RNA Polymerase II Transcription Termination
Drugs
Diseases
GWAS
Elevated fasting plasma glucose (
30004843
)
Eosinophil percentage of white cells (
32888494
)
HDL cholesterol (
19060911
)
Hemoglobin levels (
32327693
)
Refractive error (
32231278
)
Anorexia nervosa, attention-deficit/hyperactivity disorder, autism spectrum disorder, bipolar disorder, major depression, obsessive-compulsive disorder, schizophrenia, or Tourette syndrome (pleiotropy) (
31835028
)
Blood protein levels (
28240269
23696881
)
Cholesterol, total (
25961943
20686565
)
Coronary artery disease (
29212778
)
Depression (
29700475
)
Hematocrit (
32888494
)
Hemoglobin (
32888494
)
Hemoglobin levels (
32327693
)
LDL cholesterol (
25961943
20686565
)
Medication use (HMG CoA reductase inhibitors) (
31015401
)
Metabolite levels (
22916037
)
Red blood cell count (
32888494
)
Serum metabolite levels (CMS) (
31636271
)
Urate levels (
31578528
)
Interacting Genes
21 interacting genes:
CHD1L
CHD7
CHD8
DHX38
HMGB1
MT-ND4
PARP1
POLR2A
RAD51
RALA
RHOU
RXRA
SIN3A
SMAD3
SMAD4
THRB
TRAF2
TRB
YBX1
ZMYM4
ZMYM6
16 interacting genes:
AARS1
ACTL7B
BCO1
CDC40
CMTM3
CSNK2A1
CTCF
E2F4
MFAP1
NDRG4
NOL3
PPP4C
SNRNP200
TNFRSF4
U2AF1
WBP4
Entrez ID
10664
9785
HPRD ID
05005
05720
Ensembl ID
ENSG00000102974
ENSG00000140829
Uniprot IDs
A0A2R8YFL0
P49711
Q92620
PDB IDs
1X6H
2CT1
5K5H
5K5I
5K5J
5K5L
5KKQ
5T00
5T0U
5UND
5YEF
5YEG
5YEH
5YEL
6QNX
5YZG
6ZYM
7A5P
Enriched GO Terms of Interacting Partners
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