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SMARCB1 and LDOC1
Data Source:
BioGRID
(two hybrid)
SMARCB1
LDOC1
Description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
LDOC1 regulator of NFKB signaling
Image
No pdb structure
GO Annotations
Cellular Component
Nuclear Chromosome
Chromatin
Fibrillar Center
Nucleus
Nucleoplasm
Nucleolus
SWI/SNF Complex
Protein-containing Complex
Brahma Complex
Intracellular Membrane-bounded Organelle
NpBAF Complex
NBAF Complex
Nucleus
Nucleoplasm
Nucleolus
Molecular Function
RNA Polymerase I Core Promoter Sequence-specific DNA Binding
P53 Binding
DNA Binding
Transcription Coregulator Activity
Transcription Coactivator Activity
Protein Binding
Tat Protein Binding
Nucleosomal DNA Binding
Protein Binding
Biological Process
RNA Polymerase I Preinitiation Complex Assembly
Nucleosome Disassembly
Chromatin Remodeling
Regulation Of Transcription By RNA Polymerase II
Cell Cycle
Nervous System Development
DNA Integration
Single Stranded Viral RNA Replication Via Double Stranded DNA Intermediate
ATP-dependent Chromatin Remodeling
Positive Regulation By Host Of Viral Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of DNA-binding Transcription Factor Activity
Positive Regulation Of Histone H4 Acetylation
Negative Regulation Of Histone H3-K9 Dimethylation
Negative Regulation Of Histone H3-K9 Trimethylation
Positive Regulation Of Transcription Of Nucleolar Large RRNA By RNA Polymerase I
Positive Regulation Of Glucose Mediated Signaling Pathway
Positive Regulation Of Histone H3-K9 Acetylation
Regulation Of Histone H4-K16 Acetylation
Negative Regulation Of Cell Population Proliferation
Cellular Response To Lipopolysaccharide
Cellular Response To Muramyl Dipeptide
Pathways
RMTs methylate histone arginines
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known
Drugs
Diseases
GWAS
Electrocardiogram morphology (amplitude at temporal datapoints) (
32916098
)
Fractional shortening (
29403010
)
IgG bisecting N-acetyl glucosamine phenotypes (multivariate analysis) (
28878392
)
IgG digalactosylation phenotypes (multivariate analysis) (
28878392
)
IgG disialylation phenotypes (multivariate analysis) (
28878392
)
IgG fucosylation phenotypes (multivariate analysis) (
28878392
)
IgG galactosylation phenotypes (multivariate analysis) (
28878392
)
IgG glycosylation (
23382691
)
IgG monogalactosylation phenotypes (multivariate analysis) (
28878392
)
IgG N-glycosylation phenotypes (multivariate analysis) (
28878392
32128391
)
IgG sialylation phenotypes (multivariate analysis) (
28878392
)
N-glycan levels (
31163085
)
Interacting Genes
112 interacting genes:
ABI2
AKT1
APP
ARL11
ATP5F1A
BCL2L11
BHLHE40
BLZF1
CALR
CAMK2D
CCDC120
CCDC33
CD69
CDC23
CDX2
CEBPB
CHFR
CXCL11
CYB5D2
DNAJA3
DPH6
FAM90A1
FAM9B
FUS
GADD45G
GATA1
GFAP
GOLGA2
HGS
HNRNPM
HOMEZ
HOOK2
HSF2BP
HSFY1
IHO1
IKZF3
IL16
KCTD9
KLC3
KLF1
KMT2B
KMT2C
KPNA6
KRT15
KRT19
KRT6A
KRT6B
KRT6C
LDOC1
LENG8
LNX2
LY96
LZTS2
MAP1LC3B
MAP3K20
MAPK8IP2
MBIP
MCPH1
MECP2
MESD
MIF4GD
MRPL53
MXI1
MYC
NCK2
NONO
NR0B2
NR3C1
OSGIN1
OTX2
PDPK1
PICK1
PPP1CC
PPP1R15A
PRKAB2
PRMT5
PSMB1
RAN
RB1
RELB
RINT1
RPN1
RPS6KA5
RUSC1
RXRA
SAXO1
SIN3B
SMARCA4
SMARCC2
SMARCD1
SRC
TACC2
TAF1D
TASOR2
TEKT5
TFIP11
TLE5
TNFAIP1
TNRC6A
TP53
TRIM14
TRIM27
TRIM35
TSC22D4
UBQLN4
VIM
XPO1
YEATS4
ZC3H11A
ZDHHC17
ZNF398
ZNF688
107 interacting genes:
AATF
ABLIM1
AEBP2
AP1M1
AQP1
ATF4
ATP6V1G1
BARD1
BEX2
BYSL
C1orf109
CCDC33
CCDC85B
CDC5L
CEBPE
CFAP53
CTNNBL1
DPF2
DPPA4
ENKD1
FAM107A
FAM110A
FAM161A
FAM193B
FAM50B
FAM90A1
FCHSD2
FOSL1
FXR2
GADD45GIP1
GNL3L
GPANK1
HAUS1
HDAC4
HGS
HOXB5
HOXC8
IKZF3
IKZF5
INPP1
IQCB1
JRK
KRT15
KRT18
LATS1
LENG1
LMO2
LNX1
MBD3
MEAF6
MFAP1
MSGN1
MYC
MZF1
NOD2
NRIP1
NXF1
PEG10
PLEKHF2
POLL
PPP1R18
PRPF18
PRPF31
PSMA1
PSMF1
RAB29
RALBP1
RASSF10
RIBC1
RNF6
RPP25
SCNM1
SDCBP
SETD5
SH2D4A
SMARCB1
SMARCD1
SUDS3
TASOR2
TBC1D7
TCEANC
TEAD4
THAP7
TLE5
TMSB4XP1
TNNT1
TSGA10IP
TSNAX
TTC23
UBTFL1
UTP14A
WDR25
WT1
ZBTB16
ZBTB24
ZFP1
ZGPAT
ZNF124
ZNF250
ZNF408
ZNF564
ZNF587
ZNF629
ZNF648
ZNF688
ZNF774
ZNF835
Entrez ID
6598
23641
HPRD ID
03364
02322
Ensembl ID
ENSG00000099956
ENSG00000182195
Uniprot IDs
G5E975
Q12824
Q9H836
O95751
PDB IDs
5AJ1
5GJK
5L7A
5L7B
6AX5
6KAG
6KZ7
6LTH
6LTJ
6UCH
Enriched GO Terms of Interacting Partners
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Tagcloud (Intersection)
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