LINC01554 and ACIN1

Number of citations of the paper that reports this interaction (PubMedID 30809309)
42

Data Source:
BioGRID (unspecified method)

		LINC01554	ACIN1
Description		long intergenic non-protein coding RNA 1554	apoptotic chromatin condensation inducer 1
Image		No pdb structure
GO Annotations	Cellular Component		Nucleus Nucleoplasm Cytosol Plasma Membrane Nuclear Speck Nuclear Lumen Exon-exon Junction Complex ASAP Complex
	Molecular Function		Nucleic Acid Binding RNA Binding Protein Binding ATP Hydrolysis Activity Enzyme Binding
	Biological Process		MRNA Processing Apoptotic Process RNA Splicing Erythrocyte Differentiation Apoptotic Chromosome Condensation Positive Regulation Of Apoptotic Process Positive Regulation Of Monocyte Differentiation Negative Regulation Of MRNA Splicing, Via Spliceosome
Pathways			Apoptotic cleavage of cellular proteins mRNA Splicing - Major Pathway
Drugs
Diseases
GWAS		LDL cholesterol levels in HIV infection ( 33109212)
Interacting Genes		141 interacting genes: AARS1 ACADVL ACIN1 ACTB ACTG1 ACTN1 ACTN3 ACTR3 ALDOA ANXA2 ANXA5 ANXA6 APEX1 ARHGAP1 ASS1 ATAD3A ATIC ATP5F1A BZW2 CANX CCT2 CCT3 CCT4 CCT6A CCT7 CKAP4 CS CTPS1 DDX3X DDX46 DHX9 DNAH2 DNAJA1 DST DYNC1H1 EDARADD EEF1G EEF2 EIF3A EIF3E EIF4A2 EIF4B ENO1 ENO3 EPRS1 ERO1A G3BP1 G6PD GANAB GAPDH GARS1 GDI2 GPI GTF2I HIVEP2 HMCN1 HNRNPF HSP90AA1 HSP90B1 HSPA1L HSPA5 HSPA8 HSPA9 HSPD1 HYOU1 IDH1 IPO4 IPO7 IPO9 ITPR2 KARS1 KPNA1 KPNB1 KRT18 KRT7 KRT8 KRT8P3 LRPPRC MCM7 MSN MYO18A NAP1L1 NAP1L4 NCBP1 NCL NPM1 OLA1 OXCT1 PABPC1 PCBP2 PDIA3 PDIA6 PFAS PGD PGK1 PGM1 PHGDH PKM PLOD2 PMPCA POR PPP2R1A PSMC1 PSMD2 PSMD7 PTBP1 RDX RPL6 RPSA RTCB RTN4 SARS1 SEPTIN7 SEPTIN9 SERPINH1 SFPQ SQSTM1 TARS1 TGFBI THOP1 TKT TTF2 TUBA1A TUBA8 TUBB TUBB2A TUBB3 TUBB4A TUBB4B TUBB6 TUFM TXNRD1 TYMP UBA1 VCL VCP VIM VPS35 WARS1 XPO1 XRCC5	13 interacting genes: ABCF3 AKR1C3 BTBD10 CASP3 CSNK2A1 KLHL26 LINC01554 PAFAH1B2 PCBD1 RNF10 SRPK2 SUMO2 YWHAG
Entrez ID		202299	22985
HPRD ID		16896	05191
Ensembl ID		ENSG00000236882	ENSG00000100813
Uniprot IDs			B4DQZ7 E7EQT4 Q9UKV3 S4R3H4
PDB IDs			6G6S
Enriched GO Terms of Interacting Partners?		Extracellular Exosome RNA Binding Nucleotide Binding Cytosol Cytoplasm Unfolded Protein Binding ATP-dependent Protein Folding Chaperone ATP Hydrolysis Activity ATP Binding Focal Adhesion Protein Folding Secretory Granule Lumen Cadherin Binding Ficolin-1-rich Granule Lumen Protein Folding Chaperone Structural Constituent Of Cytoskeleton Nucleotide Metabolic Process Nicotinamide Nucleotide Metabolic Process Microtubule Ubiquitin Protein Ligase Binding Nucleobase-containing Compound Metabolic Process Ligase Activity Melanosome Purine Nucleotide Metabolic Process Nucleoside Phosphate Metabolic Process Protein Refolding Nucleobase-containing Small Molecule Metabolic Process Glycolytic Process Positive Regulation Of Telomerase RNA Localization To Cajal Body Ribose Phosphate Metabolic Process ADP Catabolic Process Positive Regulation Of Protein Localization To Cajal Body Chaperonin-containing T-complex ATP Metabolic Process Purine Ribonucleoside Diphosphate Catabolic Process Ribonucleoprotein Complex Ribonucleoside Diphosphate Catabolic Process ADP Metabolic Process Nucleotide Catabolic Process Nucleoside Diphosphate Catabolic Process TRNA Aminoacylation For Protein Translation Aminoacyl-tRNA Ligase Activity Ribonucleotide Metabolic Process Microtubule Cytoskeleton Protein Folding In Endoplasmic Reticulum Regulation Of Telomerase RNA Localization To Cajal Body Positive Regulation Of Telomere Maintenance Via Telomerase Nucleobase-containing Compound Catabolic Process Translation TRNA Aminoacylation	Positive Regulation Of Protein Metabolic Process Post-translational Protein Modification Positive Regulation Of Neuron Apoptotic Process Protein Catabolic Process Positive Regulation Of Metabolic Process Anterior Neural Tube Closure Intrinsic Apoptotic Signaling Pathway In Response To Osmotic Stress Epidermal Cell Differentiation Cellular Response To Staurosporine Regulation Of Protein Stability Keratinocyte Differentiation Execution Phase Of Apoptosis Phospholipase A2 Activator Activity Regulation Of Macroautophagy Regulation Of Autophagy Catabolic Process Regulation Of Translational Initiation Protein Localization To Vacuole Positive Regulation Of Macroautophagy Protein Kinase CK2 Complex Negative Regulation Of Translational Initiation Symbiont-mediated Disruption Of Host Cell PML Body PML Body Platelet-activating Factor Acetyltransferase Activity 1-alkyl-2-acetylglycerophosphocholine Esterase Complex 4-alpha-hydroxytetrahydrobiopterin Dehydratase Activity Tyrosine Biosynthetic Process Phenylalanine 4-monooxygenase Activity Tyrosine Biosynthetic Process, By Oxidation Of Phenylalanine Presynapse Nuclear Speck Organization Protein Kinase C Inhibitor Activity Ketosteroid Monooxygenase Activity Polyprenol Catabolic Process Negative Regulation Of Retinoic Acid Biosynthetic Process Delta4-3-oxosteroid 5beta-reductase Activity Geranylgeranyl Reductase Activity 15-hydroxyprostaglandin-D Dehydrogenase (NADP+) Activity Ketoreductase Activity Prostaglandin D2 11-ketoreductase Activity Prostaglandin H2 Endoperoxidase Reductase Activity Prostaglandin F Synthase Activity Farnesol Catabolic Process Cellular Response To Jasmonic Acid Stimulus Regulation Of Isoprenoid Metabolic Process Sesquiterpenoid Metabolic Process Luteolysis Glial Cell Apoptotic Process Positive Regulation Of Aggrephagy 5-alpha-androstane-3-beta,17-beta-diol Dehydrogenase (NADP+) Activity
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