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COL6A3 and PPT1
COL6A3
PPT1
Description
collagen type VI alpha 3 chain
palmitoyl-protein thioesterase 1
Image
GO Annotations
Cellular Component
Extracellular Region
Collagen Trimer
Collagen Type VI Trimer
Extracellular Space
Endoplasmic Reticulum Lumen
Extracellular Matrix
Sarcolemma
Extracellular Exosome
Extracellular Vesicle
Extracellular Region
Extracellular Space
Nucleus
Lysosome
Lysosomal Membrane
Endoplasmic Reticulum
Golgi Apparatus
Cytosol
Synaptic Vesicle
Membrane
Axon
Dendrite
Synaptic Vesicle Membrane
Neuronal Cell Body
Lysosomal Lumen
Membrane Raft
Extracellular Exosome
Presynaptic Cytosol
Molecular Function
Serine-type Endopeptidase Inhibitor Activity
Extracellular Matrix Structural Constituent Conferring Tensile Strength
Peptidase Inhibitor Activity
Protein Binding
Palmitoyl-(protein) Hydrolase Activity
Hydrolase Activity
Phospholipase A2 Inhibitor Activity
Lysophosphatidic Acid Binding
Long-chain Fatty Acyl-CoA Hydrolase Activity
Palmitoyl Hydrolase Activity
Sulfatide Binding
Biological Process
Cell Adhesion
Muscle Organ Development
Response To UV
Response To Glucose
Phosphatidylinositol 3-kinase/protein Kinase B Signal Transduction
Neuron Apoptotic Process
Protein Depalmitoylation
Endocytosis
Receptor-mediated Endocytosis
Pinocytosis
Lysosome Organization
Lysosomal Lumen Acidification
Neurotransmitter Secretion
Nervous System Development
Brain Development
Visual Perception
Grooming Behavior
Associative Learning
Adult Locomotory Behavior
Macromolecule Catabolic Process
Protein Transport
Lipid Catabolic Process
Sphingolipid Catabolic Process
Protein Catabolic Process
Negative Regulation Of Cell Growth
Membrane Raft Organization
Toll-like Receptor 9 Signaling Pathway
Negative Regulation Of Toll-like Receptor 9 Signaling Pathway
Negative Regulation Of Apoptotic Process
Negative Regulation Of Neuron Apoptotic Process
Fatty-acyl-CoA Biosynthetic Process
Positive Regulation Of Receptor-mediated Endocytosis
Positive Regulation Of Pinocytosis
Neuron Development
Regulation Of Synapse Structure Or Activity
Pathways
Collagen degradation
Collagen biosynthesis and modifying enzymes
Signaling by PDGF
Assembly of collagen fibrils and other multimeric structures
Integrin cell surface interactions
ECM proteoglycans
ECM proteoglycans
NCAM1 interactions
Collagen chain trimerization
Fatty acyl-CoA biosynthesis
Drugs
Hexadecanesulfonyl fluoride
Palmitic Acid
Diseases
Congenital muscular dystrophies (CMD/MDC), including: Merosin-deficient CMD (MDC1A); Ullrich CMD (UCMD); Integrin alpha7-deficient CMD; CMD with joint hyperlaxity (CMDH); CMD with epidermolysis bullosa; Walker-Warburg syndrome (WWS); Muscle-eye-brain disease (MEB); Fukuyama CMD (FCMD); CMD with muscle hypertrophy (MDC1C); CMD with severe intellectual impairment and abnormal glycosylation (MDC1D); Rigid spine syndrome (RSS); LMNA-deficient CMD; CMD with respiratory failure and muscle hypertrophy (MDC1B); Bethlem myopathy
Progressive myoclonic epilepsy (PME), including: Lafora disease (LBD); Unverricht-Lundborg disease (ULD); Neuronal ceroid lipofuscinoses (NCL); Type I sialidosis; Action myoclonus-renal failure syndrome (AMRF); Type III Gaucher disease (GD)
Neuronal ceroid lipofuscinosis, including: Infantile Neuronal Ceroid Lipofuscinosis (INCL)/ Santavuori-Haltia Disease (CLN1); Late-Infantile Neuronal Ceroid Lipofuscinosis (LINCL)/ Jansky-Bielschowsky Disease (CLN2); Juvenile Neuronal Ceroid Lipofuscinosis (JNCL)/Batten Disease/ Spielmeyer-Vogt Disease (CLN3); Adult Neuronal Ceroid Lipofuscinosis (ANCL)/ Kufs Disease (CLN4); LINCL variant (CLN5, CLN6, CLN7, CLN8); Batten Disease variant (CLN9); Congenital NCL (CLN10)
GWAS
Abstraction and mental flexibility (
31596458
)
Aging (time to event) (
21782286
)
Chronic kidney disease (
30226566
)
Coronary artery disease (
33020668
29212778
30402224
)
Cortex volume (
31530798
)
HDL cholesterol (
26160806
)
Heel bone mineral density (
30598549
)
Height (
33713608
)
Hypertension (
30226566
)
Intraocular pressure (
29617998
29235454
)
Ischemic stroke (
29930801
)
LDL cholesterol (
26160806
)
Lung cancer (
28604730
)
Myocardial infarction (
30226566
)
Pulse pressure (
27841878
)
Blood protein levels (
30072576
)
Platelet count (
32888494
)
Interacting Genes
12 interacting genes:
ALPG
CDT1
DYSF
GBX2
GFRA3
KCNJ13
MMP2
NGFR
PPT1
SEPTIN2
SUDS3
TRIT1
5 interacting genes:
COL6A3
EPS15
GNAQ
LCOR
RLF
Entrez ID
1293
5538
HPRD ID
00371
07203
Ensembl ID
ENSG00000163359
ENSG00000131238
Uniprot IDs
B7ZW00
D9ZGF2
P12111
Q8N4Z1
P50897
Q5T0S4
PDB IDs
1KNT
1KTH
1KUN
2KNT
6SNK
3GRO
Enriched GO Terms of Interacting Partners
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Tagcloud (Difference)
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Tagcloud (Intersection)
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