LINC00839 and PHACTR1

Number of citations of the paper that reports this interaction (PubMedID 30631154)
13

Data Source:
BioGRID (unspecified method)

		LINC00839	PHACTR1
Description		long intergenic non-protein coding RNA 839	phosphatase and actin regulator 1
Image		No pdb structure
GO Annotations	Cellular Component		Nucleus Cytosol Synapse
	Molecular Function		Actin Binding Protein Phosphatase Inhibitor Activity Protein Binding Protein Phosphatase 1 Binding
	Biological Process		Cerebral Cortex Development Actin Cytoskeleton Organization Actomyosin Structure Organization Actin Cytoskeleton Reorganization Negative Regulation Of Catalytic Activity Stress Fiber Assembly Cell Motility Dendrite Arborization Regulation Of Neuron Migration
Pathways
Drugs
Diseases
GWAS			Adult body size ( 32376654) Alcohol consumption (drinks per week) ( 30643258 30679032) Basophil percentage of white cells ( 32888494) Blood pressure ( 22763476) Cervical artery dissection ( 25420145) Chronotype ( 30696823 26835600) Coronary artery calcification ( 22144573 23394302) Coronary artery disease ( 32469254 29212778 24262325 30104761 26343387 28714974 33020668) Coronary artery disease (myocardial infarction, percutaneous transluminal coronary angioplasty, coronary artery bypass grafting, angina or chromic ischemic heart disease) ( 28714975) Coronary artery disease or ischemic stroke ( 24262325) Coronary artery disease or large artery stroke ( 24262325) Coronary heart disease ( 22745674 21846871 22751097 21378988 21378990) Decline in glucose metabolism in posterior cingulate cortex ( 29130521) Diastolic blood pressure ( 27618447) Electrocardiogram morphology (amplitude at temporal datapoints) ( 32916098) Gait speed in old age ( 28077804) Hand grip strength ( 29691431) Headache ( 29397368) Hip geometry ( 17903296) HIV-1 viral setpoint ( 26039976) Hypertension ( 27618447) Idiopathic dilated cardiomyopathy ( 29495422) Medication use (antimigraine preparations) ( 31015401) Metabolite levels ( 23823483) Migraine ( 22683712 27182965 23793025 27322543) Migraine - clinic-based ( 23793025) Migraine without aura ( 23793025 27322543) Morning person ( 30696823) Myocardial infarction ( 33532862 26343387) Myocardial infarction (early onset) ( 19198609) Pulse pressure ( 28135244 27841878 27618447 30578418) Response to serotonin reuptake inhibitors in major depressive disorder ( 25897834) Spontaneous coronary artery dissection ( 32887874 32374345) Systolic blood pressure ( 27841878 27618447 30578418)
Interacting Genes		82 interacting genes: ADAMTS15 AKAP13 ALDH16A1 APOL3 BFSP1 CALM1 CC2D1B CCDC168 CCDC93 CDC16 CEP192 CEP295NL CHPF CIZ1 CLGN CLPTM1 COPB1 DNAH10 DPEP3 EFL1 EID2 EMX1 FAAP100 FAM13B FBXL5 HAPLN4 IQCN IRX4 JAKMIP2 KLK14 KRT1 KRT6B L1CAM MEX3A MEX3B MEX3C MEX3D MICAL2 MYO7A NDUFA2 NOC4L NOTCH3 NVL OS9 P4HB PABPN1 PALM3 PARP6 PHACTR1 PKD1L2 PLOD3 PNPLA3 POMT2 PRSS1 PRSS3 PTBP1 PTEN PTPRA QSOX2 RAPGEF6 RIF1 RPLP2 RPTOR RYR2 SEMA4D SEPTIN12 SEPTIN9 SERHL2 SLC7A14 SOWAHB SREBF2 SYNE1 SYNE3 TAS1R3 TCF24 TMC4 TRO UBE2S VANGL1 YAP1 YIPF1 ZFPL1	5 interacting genes: ACTA1 C14orf119 CBX8 LINC00839 PPP1CA
Entrez ID		84856	221692
HPRD ID		17516	12283
Ensembl ID		ENSG00000185904	ENSG00000112137
Uniprot IDs			A0A6Q8PFA8 A0A6Q8PG87 B4DHU0 Q9C0D0
PDB IDs			6ZEE 6ZEF 6ZEG 6ZEH 6ZEI 6ZEJ
Enriched GO Terms of Interacting Partners?
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