TNF and STOM

Number of citations of the paper that reports this interaction (PubMedID 32296183)
86

Data Source:
BioGRID (two hybrid)

		TNF	STOM
Description		tumor necrosis factor	stomatin
Image			No pdb structure
GO Annotations	Cellular Component	Phagocytic Cup Extracellular Region Extracellular Space Plasma Membrane Integral Component Of Plasma Membrane External Side Of Plasma Membrane Cell Surface Membrane Raft Recycling Endosome	Extracellular Space Mitochondrion Endoplasmic Reticulum Cytoskeleton Plasma Membrane Integral Component Of Plasma Membrane Membrane Vesicle Azurophil Granule Membrane Specific Granule Membrane Melanosome Membrane Raft Perinuclear Region Of Cytoplasm Extracellular Exosome Tertiary Granule Membrane Blood Microparticle
	Molecular Function	Transcription Cis-regulatory Region Binding Protease Binding Cytokine Activity Tumor Necrosis Factor Receptor Binding Protein Binding Identical Protein Binding	Protein Binding Identical Protein Binding Protein Homodimerization Activity RNA Polymerase Binding
	Biological Process	Negative Regulation Of Transcription By RNA Polymerase II MAPK Cascade Microglial Cell Activation Positive Regulation Of Cytokine Production Positive Regulation Of Protein Phosphorylation Negative Regulation Of Endothelial Cell Proliferation Chronic Inflammatory Response To Antigenic Stimulus Regulation Of Immunoglobulin Production Negative Regulation Of Cytokine Production Involved In Immune Response Positive Regulation Of Chronic Inflammatory Response To Antigenic Stimulus Positive Regulation Of Humoral Immune Response Mediated By Circulating Immunoglobulin Glucose Metabolic Process Regulation Of Transcription By RNA Polymerase II Activation Of Cysteine-type Endopeptidase Activity Involved In Apoptotic Process Inflammatory Response Humoral Immune Response JNK Cascade Extrinsic Apoptotic Signaling Pathway Via Death Domain Receptors Intrinsic Apoptotic Signaling Pathway In Response To DNA Damage Response To Virus Response To Salt Stress Vascular Endothelial Growth Factor Production Positive Regulation Of Gene Expression Negative Regulation Of Gene Expression Negative Regulation Of Alkaline Phosphatase Activity Negative Regulation Of Lipid Storage Positive Regulation Of Phosphatidylinositol 3-kinase Signaling Extracellular Matrix Organization Osteoclast Differentiation Sequestering Of Triglyceride Cortical Actin Cytoskeleton Organization Positive Regulation Of Protein-containing Complex Assembly Positive Regulation Of Fever Generation Lipopolysaccharide-mediated Signaling Pathway Negative Regulation Of Interleukin-6 Production Positive Regulation Of Chemokine Production Positive Regulation Of Fractalkine Production Positive Regulation Of Interferon-gamma Production Positive Regulation Of Interleukin-1 Beta Production Positive Regulation Of Interleukin-6 Production Positive Regulation Of Interleukin-8 Production Positive Regulation Of Peptidyl-serine Phosphorylation Tumor Necrosis Factor-mediated Signaling Pathway Positive Regulation Of Heterotypic Cell-cell Adhesion Negative Regulation Of Myosin-light-chain-phosphatase Activity Positive Regulation Of Tyrosine Phosphorylation Of STAT Protein Positive Regulation Of Apoptotic Process Positive Regulation Of Programmed Cell Death Regulation Of I-kappaB Kinase/NF-kappaB Signaling Positive Regulation Of I-kappaB Kinase/NF-kappaB Signaling Negative Regulation Of Cysteine-type Endopeptidase Activity Involved In Apoptotic Process Negative Regulation Of Protein-containing Complex Disassembly Positive Regulation Of Protein-containing Complex Disassembly Positive Regulation Of Cysteine-type Endopeptidase Activity Involved In Apoptotic Process Positive Regulation Of MAP Kinase Activity Positive Regulation Of MAPK Cascade Protein Kinase B Signaling Positive Regulation Of JUN Kinase Activity Positive Regulation Of Neuron Apoptotic Process Negative Regulation Of Blood Vessel Endothelial Cell Migration Negative Regulation Of Viral Genome Replication Positive Regulation Of Nitric Oxide Biosynthetic Process Regulation Of Fat Cell Differentiation Negative Regulation Of Fat Cell Differentiation Negative Regulation Of Myoblast Differentiation Negative Regulation Of Osteoblast Differentiation Positive Regulation Of Osteoclast Differentiation Positive Regulation Of Protein Catabolic Process Positive Regulation Of Cell Adhesion Positive Regulation Of Protein Kinase Activity Negative Regulation Of Transcription, DNA-templated Positive Regulation Of Transcription, DNA-templated Negative Regulation Of Mitotic Cell Cycle Positive Regulation Of Transcription By RNA Polymerase II Positive Regulation Of Translational Initiation By Iron Negative Regulation Of Glucose Import Positive Regulation Of JNK Cascade Positive Regulation Of Receptor Signaling Pathway Via JAK-STAT Astrocyte Activation Embryonic Digestive Tract Development Positive Regulation Of Smooth Muscle Cell Proliferation Positive Regulation Of Inflammatory Response Positive Regulation Of Phagocytosis Negative Regulation Of Neurogenesis Regulation Of Insulin Secretion Positive Regulation Of Synaptic Transmission Regulation Of Synapse Organization Defense Response To Gram-positive Bacterium Cognition Leukocyte Tethering Or Rolling Negative Regulation Of Lipid Catabolic Process Positive Regulation Of Nitric-oxide Synthase Activity Positive Regulation Of Membrane Protein Ectodomain Proteolysis Positive Regulation Of DNA-binding Transcription Factor Activity Positive Regulation Of NF-kappaB Transcription Factor Activity Positive Regulation Of Nitrogen Compound Metabolic Process Positive Regulation Of Protein Transport Response To Glucocorticoid Positive Regulation Of Hair Follicle Development Positive Regulation Of Protein Kinase B Signaling Regulation Of Synaptic Transmission, Glutamatergic Positive Regulation Of Glial Cell Proliferation Positive Regulation Of Vitamin D Biosynthetic Process Positive Regulation Of Calcidiol 1-monooxygenase Activity Epithelial Cell Proliferation Involved In Salivary Gland Morphogenesis Regulation Of Branching Involved In Salivary Gland Morphogenesis Negative Regulation Of Vascular Wound Healing Negative Regulation Of Branching Involved In Lung Morphogenesis Positive Regulation Of ERK1 And ERK2 Cascade Positive Regulation Of Calcineurin-NFAT Signaling Cascade Cellular Response To Amino Acid Stimulus Cellular Response To Nicotine Cellular Response To Organic Cyclic Compound Positive Regulation Of Mononuclear Cell Migration Positive Regulation Of Podosome Assembly Endothelial Cell Apoptotic Process Protein Localization To Plasma Membrane Extrinsic Apoptotic Signaling Pathway Necroptotic Signaling Pathway Positive Regulation Of Neuroinflammatory Response Positive Regulation Of Interleukin-33 Production Positive Regulation Of Cytokine Production Involved In Inflammatory Response Negative Regulation Of Amyloid-beta Clearance Positive Regulation Of NIK/NF-kappaB Signaling Positive Regulation Of Synoviocyte Proliferation Positive Regulation Of Superoxide Dismutase Activity Positive Regulation Of Amyloid-beta Formation Positive Regulation Of Pri-miRNA Transcription By RNA Polymerase II Positive Regulation Of Protein Localization To Plasma Membrane Regulation Of Establishment Of Endothelial Barrier Negative Regulation Of Bicellular Tight Junction Assembly Positive Regulation Of I-kappaB Phosphorylation Negative Regulation Of Production Of MiRNAs Involved In Gene Silencing By MiRNA Positive Regulation Of Vascular Associated Smooth Muscle Cell Proliferation Positive Regulation Of Leukocyte Adhesion To Vascular Endothelial Cell Positive Regulation Of Leukocyte Adhesion To Arterial Endothelial Cell Positive Regulation Of Protein Localization To Cell Surface Negative Regulation Of Signaling Receptor Activity Positive Regulation Of Blood Microparticle Formation Positive Regulation Of Chemokine (C-X-C Motif) Ligand 2 Production Regulation Of Endothelial Cell Apoptotic Process Regulation Of Reactive Oxygen Species Metabolic Process Negative Regulation Of Apoptotic Signaling Pathway Positive Regulation Of Extrinsic Apoptotic Signaling Pathway Negative Regulation Of Extrinsic Apoptotic Signaling Pathway In Absence Of Ligand	Positive Regulation By Host Of Viral Genome Replication Positive Regulation Of Viral Process Positive Regulation Of Protein Targeting To Membrane Regulation Of Acid-sensing Ion Channel Activity
Pathways		Transcriptional regulation of white adipocyte differentiation TNFR1-induced proapoptotic signaling Regulation of TNFR1 signaling TNFR1-induced NFkappaB signaling pathway TNFR1-mediated ceramide production TNFR2 non-canonical NF-kB pathway Interleukin-10 signaling Interleukin-4 and Interleukin-13 signaling TNF signaling	Stimuli-sensing channels Neutrophil degranulation RHOA GTPase cycle RHOB GTPase cycle RHOC GTPase cycle CDC42 GTPase cycle RHOQ GTPase cycle RHOH GTPase cycle RHOJ GTPase cycle
Drugs		Etanercept Adalimumab Infliximab Chloroquine Epinephrine Pseudoephedrine Thalidomide Glucosamine Clenbuterol Pranlukast Amrinone Afelimomab YSIL6 SD118 PN0621 OMS-103HP Talmapimod VX-702 Atiprimod CRx-139 CYT007-TNFQb Andrographolide Ethyl pyruvate AME-527 PR-104 Plinabulin Dexanabinol Onercept Golimumab Certolizumab pegol Pomalidomide Polaprezinc Foreskin fibroblast (neonatal) Foreskin keratinocyte (neonatal) Bryostatin 1 Binimetinib Dilmapimod Glycyrrhizic acid
Diseases
GWAS		AIDS progression ( 19115949) Asthma ( 31619474) Asthma (childhood onset) ( 31619474) Asthma and major depressive disorder ( 31619474) Autism spectrum disorder or schizophrenia ( 28540026) Blood protein levels ( 28240269) Cervical cancer ( 28806749) Crohn's disease ( 21102463) Inflammatory bowel disease ( 28067908) Malaria ( 31844061) Neonatal lupus ( 20662065) Psychosis (atypical) ( 24132900) Pulse pressure ( 30578418) Type 1 diabetes (age at diagnosis) ( 33179336) Ulcerative colitis ( 28067908) Waist-to-hip ratio adjusted for BMI ( 34021172)
Interacting Genes		61 interacting genes: ADAM17 ADAM9 AQP3 BCL2L13 BGN BTNL9 C10orf67 C2 CBWD1 CCDC107 CCDC70 CLDN7 CLEC10A CREB3L1 CSF1 CYB5R3 DCN FAM209A FFAR2 FNDC9 FYN IFNG KASH5 KCNC4 LMNA LRRC25 LRRTM2 LYN MMP17 MOB1B MRM3 NFKBIA PAGE1 PANX1 PDIK1L PILRB PIP4P2 PLEKHO1 POU2F1 PPP1R11 PRTN3 RC3H1 RIPK1 RNF19B SEC61A1 SGCB SLC14A2 SLC30A4 SSMEM1 STOM STX1A TAPBP TMPRSS2 TNFRSF1A TNFRSF1B TNXB TRAF2 VSIR YWHAQ ZCCHC12 ZFP36	89 interacting genes: AIG1 APOA2 ASIC1 ASIC2 ASIC3 ASS1 ATP1B3 ATP6V0B ATP6V0C BCL2L2 BNIP1 C2 C3orf52 CFHR5 CHST1 CLDN19 CLRN2 CMTM5 CNIH3 CRAT CTXN3 CYB5B CYB5R3 DAGLA DVL3 EMP1 ERG28 FAXDC2 FPGS FUNDC2 GIMAP1 GIMAP5 GPR25 GPR37L1 GRM2 HMOX2 KCNK1 KTN1 LANCL1 LNPEP MGLL MMP14 MT2A NKG7 NUP214 ORMDL1 PEDS1-UBE2V1 PEMT PGA4 PMP22 PSMB7 PTCH1 RPL13A RPRM RTP2 RUVBL1 RUVBL2 SCD SELENOK SERP2 SFT2D1 SFT2D2 SFXN1 SFXN5 SLC2A1 SLC35B4 SMCO4 STX6 STXBP1 TECR THSD7B TMEM109 TMEM120B TMEM140 TMEM14B TMEM203 TMEM208 TMEM254 TMEM60 TMEM86B TMEM98 TMPO TNF TNFRSF10C TSPO2 VAMP4 VAV2 WFDC2 YIPF6
Entrez ID		7124	2040
HPRD ID		01855	00585
Ensembl ID		ENSG00000232810	ENSG00000148175
Uniprot IDs		P01375 Q5STB3	A0A024R882 F8VSL7 P27105
PDB IDs		1A8M 1TNF 2AZ5 2E7A 2TUN 2ZJC 2ZPX 3ALQ 3IT8 3L9J 3WD5 4G3Y 4TSV 4TWT 4Y6O 5M2I 5M2J 5M2M 5MU8 5TSW 5UUI 5WUX 5YOY 6OOY 6OOZ 6OP0 6RMJ 6X81 6X82 6X83 6X85 6X86 7ASY 7AT7 7ATB 7JRA 7KP9 7KPA 7KPB
Enriched GO Terms of Interacting Partners?
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