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KDM5B and PAX9
Data Source:
BioGRID
(affinity chromatography technology)
HPRD
(in vivo, two hybrid)
KDM5B
PAX9
Description
lysine demethylase 5B
paired box 9
Image
No pdb structure
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Cytosol
Chromatin
Nucleus
Molecular Function
DNA Binding
Transcription Corepressor Activity
Protein Binding
Zinc Ion Binding
Histone Demethylase Activity
Histone Demethylase Activity (H3-K4 Specific)
Histone Demethylase Activity (H3-trimethyl-K4 Specific)
Histone Demethylase Activity (H3-dimethyl-K4 Specific)
Histone Binding
Dioxygenase Activity
Sequence-specific Double-stranded DNA Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
DNA-binding Transcription Activator Activity, RNA Polymerase II-specific
Protein Binding
Sequence-specific Double-stranded DNA Binding
Biological Process
Chromatin Remodeling
Regulation Of Transcription By RNA Polymerase II
Single Fertilization
Post-embryonic Development
Positive Regulation Of Gene Expression
Positive Regulation Of Mammary Gland Epithelial Cell Proliferation
Histone H3-K4 Demethylation
Histone H3-K4 Demethylation, Trimethyl-H3-K4-specific
Cellular Response To Fibroblast Growth Factor Stimulus
Negative Regulation Of Transcription, DNA-templated
Rhythmic Process
Branching Involved In Mammary Gland Duct Morphogenesis
Mammary Duct Terminal End Bud Growth
Response To Fungicide
Uterus Morphogenesis
Lens Fiber Cell Differentiation
Cellular Response To Leukemia Inhibitory Factor
Regulation Of Estradiol Secretion
Regulation Of Transcription By RNA Polymerase II
Endoderm Development
Odontogenesis
Regulation Of Odontogenesis
Negative Regulation Of Transcription, DNA-templated
Positive Regulation Of Transcription By RNA Polymerase II
Anatomical Structure Development
Face Morphogenesis
Cellular Response To Growth Factor Stimulus
Pathways
HDMs demethylate histones
TFAP2 (AP-2) family regulates transcription of cell cycle factors
Drugs
Diseases
Tooth agenesis; Hypodontia
GWAS
Breast cancer (
29059683
23535729
)
Height (
28552196
)
Lobe attachment (rater scored) (
29198719
)
Lobe attachment (rater-scored or self-reported) (
29198719
)
Nonsyndromic cleft palate (
31609978
)
Prostate cancer (
29892016
)
Interacting Genes
5 interacting genes:
FOXG1
KDM1A
MBD3
PAX9
RB1
26 interacting genes:
EYA2
FUBP3
GTF2A1L
KDM5B
KLF4
KRTAP13-3
LMO2
MSX1
MYLIP
NR0B2
PFDN5
PLAGL2
SFN
SLAIN1
SSX4
TEPSIN
TLE1
TLE2
TLE5
TRIP13
TRIP4
VPS37C
WWOX
ZNF343
ZNF440
ZNF580
Entrez ID
10765
5083
HPRD ID
09251
01336
Ensembl ID
ENSG00000117139
ENSG00000198807
Uniprot IDs
A0A3B3ITA8
Q9UGL1
P55771
Q2L4T1
PDB IDs
2MA5
2MNY
2MNZ
5A1F
5A3N
5A3P
5A3T
5A3W
5FPL
5FPU
5FUN
5FUP
5FV3
5FY4
5FY5
5FY9
5FYB
5FYS
5FYT
5FYU
5FYV
5FYY
5FYZ
5FZ0
5FZ1
5FZ3
5FZ4
5FZ6
5FZ7
5FZ8
5FZ9
5FZA
5FZB
5FZC
5FZD
5FZE
5FZF
5FZG
5FZH
5FZI
5FZK
5FZL
5FZM
5LW9
5LWB
6EIN
6EIU
6EIY
6EJ0
6EJ1
6EK6
6H4Z
6H50
6H51
6H52
6RBI
Enriched GO Terms of Interacting Partners
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Tagcloud (Difference)
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Tagcloud (Intersection)
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