KRT40 and FRG1

Number of citations: 56 (PubMedID 25416956)
Data Source: BioGRID (two hybrid)

		KRT40	FRG1
Name		keratin 40	FSHD region gene 1
Structure		No pdb structure
GO Annotations	Cellular Component	Cytosol Cytoskeleton Intermediate Filament Keratin Filament	Nucleus Spliceosomal Complex Nucleolus Cytoplasm Cajal Body Z Disc Striated Muscle Dense Body Catalytic Step 2 Spliceosome
	Molecular Function	Structural Molecule Activity Protein Binding Structural Constituent Of Skin Epidermis	RNA Binding Actin Binding Protein Binding Actin Filament Binding
	Biological Process	Morphogenesis Of An Epithelium Epithelial Cell Differentiation Intermediate Filament Organization	MRNA Splicing, Via Spliceosome RRNA Processing MRNA Processing Muscle Organ Development RNA Splicing Ribosome Biogenesis
Pathways		Keratinization Formation of the cornified envelope	None
GWAS		Gut microbiota (bacterial taxa, rank normal transformation method) ( 32572223 )	Brain volume in infants (cerebrospinal fluid) ( 28763065 ) Periodontitis (CDC/AAP) ( 24024966 ) Urinary albumin excretion ( 30220432 ) Urinary albumin excretion (no hypertensive medication) ( 30220432 )
Interacting Genes		385 interacting genes: ACSF3 ADAMTS1 ADAMTSL3 AEN AGXT AIRIM AKAP17A ALDH3B1 ANKRD36BP1 AP1M1 AQP1 AQP5 ARID5A ARMC7 ARSI ASMTL ATOSA ATPAF2 AVPI1 AXIN1 BAHD1 BARD1 BEX2 BMS1P1 BRME1 BYSL C10orf62 C11orf87 C19orf73 C1orf216 C22orf46P C2orf68 C8orf48 CA6 CARD9 CATIP CATSPERT CBX8 CCDC112 CCDC116 CCDC120 CCDC146 CCDC185 CCDC198 CCDC26 CCDC93 CCER1 CCNG1 CD33 CDC20B CDK18 CDK5R1 CELA2B CEP57 CEP57L1 CFAP206 CHCHD2 CHCHD3 CHIC2 CLEC18A CNNM3 CNTF COL8A1 COMT COX5A CREB5 CRY2 CTSZ CWF19L2 CYCS CYTH4 DAAM2 DCDC2B DCX DDX6 DHX57 DLGAP2 DMRT3 DOCK2 DOCK8 DTNB EIF4E2 ELOA ENKD1 EXOC3-AS1 FADS2 FAM107A FAM124B FAM27E3 FAM74A4 FAM90A1 FARS2 FASLG FBF1 FBXL18 FBXO34 FBXW5 FEZF1 FKBP1B FNDC11 FOXB1 FRG1 GAD1 GADD45GIP1 GARIN6 GATA2 GATAD2A GEM GFOD1 GGN GLIDR GNAI2 GNE GNG5 GOLGA6L2 GPATCH2L GTF3C5 GUCD1 HAPLN2 HAUS1 HBA2 HBZ HCK HDAC4 HGS HNRNPLL HOXA1 HOXB9 HOXC8 HSD3B7 HSF4 HSPA12B HSPD1 ING5 INO80B INPP5D IQUB ISCU ITGB4 ITGB5 JOSD1 KANK2 KAT5 KCTD9 KDM1A KIFC3 KLHL38 KPNA2 KRT1 KRT2 KRT20 KRT3 KRT4 KRT5 KRT6A KRT6B KRT6C KRT71 KRT72 KRT73 KRT74 KRT75 KRT76 KRT78 KRT79 KRT8 KRT81 KRT82 KRT83 KRT85 KRT86 LAGE3 LCE3E LENG1 LHX4 LIMS2 LIN37 LINC00636 LINC01588 LMF2 LMO1 LMO2 LMO4 LNX1 LRCH4 MAB21L2 MAGOHB MAPKBP1 MARK4 MED8 METTL17 MFAP1 MID2 MOB3C MOBP MOS MRPL11 MRRF MSRB3 MTA1 MXI1 MYPOP NAB2 NAPRT NEK6 NFKBID NINJ1 NOL4L-DT NPBWR2 NPPB NR1D2 NXF1 ODAD4 OIP5 OPCML OTUB2 PDLIM5 PEX39 PGLS PHF1 PHF21A PHLDA1 PIGS PIMREG PIN1 PKD2 POLDIP3 POLL POM121L8P POP5 PPP1R18 PRAM1 PRKAA1 PRKAB2 PRPF18 PRPF31 PSMA1 PSMB1 PSMC5 PTGER3 PTPMT1 PXMP2 QPRT RAB3IL1 RAB3IP RAC1 RASSF5 RBM41 RCOR3 RECK RGS8 RNF213 RNF6 RPL11 RSPH14 RTP5 RWDD2B RXRB SCAND1 SCNM1 SCOC SEMA4C SETD5 SH2D4A SHC3 SHFL SIRPA SLC23A1 SLC25A10 SLC35D4 SLIRP SLU7 SMARCE1 SMCO4 SNAI1 SNHG11 SNRPB SNW1 SPATA24 SPATA31J1 SPATC1L SPEF1 SPG7 SPMIP2 SRSF2 SSX2 SSX2IP SUOX SYT6 TACO1 TAPBPL TBC1D16 TBC1D21 TBC1D22B TCEA2 TCEANC TCHP TEAD4 THAP7 TIE1 TLE5 TMEM231 TMSB4X TNIP3 TNNT1 TRIM42 TROAP TRPV6 TSC22D4 TSGA10IP TSHZ3 TTC23 TTC9C TTLL10 TXLNA TXN2 TXNDC5 TYK2 TYRO3 UACA UBASH3A UCMA USHBP1 USP2 USP21 UTP14C UTP23 UXT VEZF1 WDR25 WT1 WT1-AS ZBTB16 ZBTB24 ZBTB38 ZBTB42 ZC2HC1C ZFHX3 ZFP1 ZFP2 ZFP69B ZFYVE21 ZFYVE26 ZGPAT ZMAT2 ZNF101 ZNF124 ZNF138 ZNF165 ZNF17 ZNF20 ZNF202 ZNF230 ZNF250 ZNF26 ZNF266 ZNF286A ZNF317 ZNF319 ZNF329 ZNF337 ZNF408 ZNF410 ZNF417 ZNF438 ZNF439 ZNF446 ZNF488 ZNF490 ZNF564 ZNF569 ZNF575 ZNF580 ZNF581 ZNF587 ZNF625 ZNF655 ZNF688 ZNF697 ZNF702P ZNF76 ZNF792 ZNF844 ZNRF2P1 ZSCAN21	6 interacting genes: CEBPA EXOSC8 GNMT KRT40 LZTS2 RBPMS
Entrez ID		125115	2483
HPRD ID		08304	03176
Ensembl ID		ENSG00000204889	ENSG00000109536
Uniprot IDs		G3V1C2 Q6A162	Q14331
PDB IDs		Not available	6ZYM 7A5P 8I0W
GO Terms Enriched among Interactors		Protein Binding Structural Constituent Of Skin Epidermis Keratin Filament Keratinization Intermediate Filament Organization Intermediate Filament Cytoskeleton Organization Intermediate Filament-based Process Intermediate Filament Zinc Ion Binding Regulation Of DNA-templated Transcription Regulation Of RNA Biosynthetic Process Regulation Of Transcription By RNA Polymerase II Regulation Of RNA Metabolic Process DNA-binding Transcription Factor Activity, RNA Polymerase II-specific Supramolecular Fiber Organization RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding Nucleus Metal Ion Binding DNA Binding Regulation Of Nucleobase-containing Compound Metabolic Process Cytoskeleton Organization Regulation Of Gene Expression Negative Regulation Of DNA-templated Transcription Negative Regulation Of RNA Biosynthetic Process Nuclear Speck Regulation Of Macromolecule Biosynthetic Process Negative Regulation Of RNA Metabolic Process Carbon Dioxide Transport	RNA Polymerase I Transcription Regulatory Region Sequence-specific DNA Binding Response To Vitamin B2 C/EBP Complex Sarcosine Metabolic Process Glycine N-methyltransferase Activity S-adenosylhomocysteine Metabolic Process Primary Ureteric Bud Growth CHOP-C/EBP Complex U5 SnRNA 3'-end Processing U1 SnRNA 3'-end Processing White Fat Cell Proliferation Identical Protein Binding MRNA CDS Binding Urea Metabolic Process HMG Box Domain Binding Response To Phenylpropanoid Urea Cycle STAT Family Protein Binding Negative Regulation Of Hematopoietic Stem Cell Proliferation Rb-E2F Complex Fat Cell Proliferation Pre-mRNA Intronic Binding Exoribonuclease Complex Exonucleolytic Trimming To Generate Mature 3'-end Of 5.8S RRNA From Tricistronic RRNA Transcript (SSU-rRNA, 5.8S RRNA, LSU-rRNA) TRAMP-dependent TRNA Surveillance Pathway TRNA Surveillance TRNA Decay RRNA 3'-end Processing Nucleolar Exosome (RNase Complex) U4 SnRNA 3'-end Processing Nuclear MRNA Surveillance Nuclear Polyadenylation-dependent RRNA Catabolic Process Glycine Binding Folic Acid Binding S-adenosylmethionine Metabolic Process Spindle Midzone Assembly Ureter Morphogenesis Microtubule Severing Response To Lithium Ion Transcription By RNA Polymerase I Regulation Of Hematopoietic Stem Cell Proliferation Cellular Response To Lithium Ion Nitrogen Cycle Metabolic Process Generation Of Precursor Metabolites And Energy White Fat Cell Differentiation Interleukin-6-mediated Signaling Pathway Osteoblast Development Cytoplasmic Exosome (RNase Complex) RRNA Catabolic Process Nuclear Exosome (RNase Complex)